Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3229 ATGGCGGCACCACCCGGAAACCTCTCTCTCTCCTCCACCACCTCCACCACCCCCCTTTCCAAACCCTCTCCTCTCCCTCTCTTCCACAACAGAACCCTCCCAAAACCCACCAACACCCTCCCCTCACGCGCCTTCTCCCCCCTCCACAAAGCCCTCTCCTCCAAAAGCCCCCTCTCCCACCACATCCTCTCCTCACCAAAACAGCCCTCCTTCGATTCCTACGATGATGACGAAAAGCCACGCGAGGAGTGCGGCGTCGTTGGAATCTACGGCGACCCAGAAGCCTCCCGCCTCTGCTACTTAGCCCTCCACGCCCTCCAGCACCGCGGCCAAGAAGGCGCCGGCATCGTTACCGTCAACAACAACGTCCTCCAGTCCATCACCGGCGTTGGCCTCGTCTCCGACGTCTTCAACGAATCCAAGCTCGACCAGTTGCCCGGTAACCTCGCCATCGGCCACGTCCGTTACTCCACCGCCGGCCAGTCCATGCTCAAGAACGTCCAGCCCTTCGTCGCCGGTTACCGCTTCGGGTCCGTCGGTGTCGCCCACAACGGTAACCTCGTCAACTACCGAACCTTGAGGGCAAAACTGGAAGATAACGGTTCCATTTTTAACACAACCTCGGACACCGAGGTTGTTCTTCACCTTATTGCAACATCGAAACACAGGCCTTTTATATTGAGGATCGTTGATGCTTGTGAGAAGCTTGAAGGTGCTTATTCCATTGTGTTTGTTACTGAGGACAAGCTTGTTGCTGTTAGGGACCCTTTTGGGTTTAGGCCTTTGGTTATGGGGAGGAGGAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTGGATTTGATTGAAGCTACTTATGAGAGAGAAGTTTACCCTGGTGAGGTTCTTGTGGTTGACAAAAATGGGGTTCAGAGTCTTTGCCTTATGTCTCATCCACAGCCTAAGCAGTGCATCTTTGAGCATATCTACTTTGCTTTGCCGAATTCTGTTGTTTTTGGGAGGTCTGTGTATGAGTCAAGGAGGCAGTTTGGTGAGATTCTTGCCACTGAGAGCCCTGTGGATTGTGATGTTGTGATTGCTGTGCCTGATTCTGGTGTTGTTGCTGCTCTTGGATATGCTGCTAAAGCTGGGGTCCCTTTTCAGCAAGGGCTTATTAGGTCACACTATGTTGGGAGGACTTTCATTGAGCCGTCTCAGAAGATTAGGGACTTTGGTGTGAAGCTTAAGCTCTCACCCGTTCGTGCTGTTCTTGAGGGGAAAAGGGTTGTGGTTGTTGATGACTCTATTGTTAGGGGAACCACTTCTTCAAAGATTGTGAGGTTGCTGAAAGAGGCTGGTGCTAAAGAGGTTCACATGAGGATTGCAAGCCCACCAATTATTGGGTCTTGTTACTATGGTGTGGACACACCAAGCTCGGAGGAGTTGATTTCCAATAGGATGAGTGTTGAGGAGATAAGGGAGTTTATTGGGTCAGATTCACTTGCTTTTCTCCCATTTGATAGCTTGCAGAAGCTGTTGGGGAATGAATCTCCTAATTTCTGCTATGCTTGTTTCTCTGGTCAGTACCCTGTCGAGCCCAGAGAGGTTAAGGTGAAGAGGGTTGGTGACTTTGTGGATGATGGGTTAAATGGGAGTTTGGAGTCTATTGATGGTGGTTGGGTTCAGGCAAACCTAAGTAGTCCCAAAGAGGTGAAGGTTGGTACTAGTCTCTGA 1719 0.509 MAAPPGNLSLSSTTSTTPLSKPSPLPLFHNRTLPKPTNTLPSRAFSPLHKALSSKSPLSHHILSSPKQPSFDSYDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLQKLLGNESPNFCYACFSGQYPVEPREVKVKRVGDFVDDGLNGSLESIDGGWVQANLSSPKEVKVGTSL* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3229 572 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 60 556 - -
Dod03g3229 572 MobiDBLite consensus disorder prediction 1 79 - -
Dod03g3229 572 SUPERFAMILY PRTase-like 319 530 IPR029057 -
Dod03g3229 572 Gene3D - 343 507 IPR029057 -
Dod03g3229 572 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 84 303 IPR017932 -
Dod03g3229 572 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 84 525 IPR029055 -
Dod03g3229 572 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g3229 572 Hamap Amidophosphoribosyltransferase [purF]. 83 524 IPR005854 GO:0004044|GO:0009113
Dod03g3229 572 Pfam Phosphoribosyl transferase domain 358 453 IPR000836 -
Dod03g3229 572 TIGRFAM purF: amidophosphoribosyltransferase 84 525 IPR005854 GO:0004044|GO:0009113
Dod03g3229 572 Pfam Glutamine amidotransferase domain 162 281 IPR017932 -
Dod03g3229 572 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 84 307 IPR029055 -
Dod03g3229 572 CDD GPATase_N 84 334 IPR035584 -
Dod03g3229 572 CDD PRTases_typeI 346 457 IPR000836 -
Dod03g3229 572 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 60 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3229 Dod-Chr3 64887910 64889990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3229 75 557 PRT Gene Family AT2G16570 87.010 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3229 K00764 - gmx:100791919 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3229 03 64887910 64889990 Dod03g3229 03 64887910 64889990 ECH