Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3228 ATGATAAAGAAGGAAGACTCGGAGGGATCAGGGGAGAAGAAATTCTCTCCGGAAGGTGAAGTGGTTGATGATCTGTTCTCTGCGTACATGAACTTGGACAACATTAACGACGCGCTGAATAATAATAATTCTTCTGATGAGAAGAACGGGACAGAGAATAATGATTTGGATAGTAGGGCGAGTGGGACGAAGACTAATAACACTGGTGGTGGTGGTGGTGATAGCAGTGATAACGAAGCTGAGAGCAGTGTTAATGAGCAAGAAGGTGGAGGAGTGAAGAGGAGTGCTGGTGGTGATGTTGCTGCTGCTGCTGCTGCTGCTGCTGCGGCCACGAGTAGTGGTAGTAGGCACTATAGGAGTGTTTCGATGGATAGTTTTATTGGGAAGTTGAGTTTCAGTGATCATGAGTCGTTGTTGTCTTTGCCGCCTAGTAAGATGATGATGATGCCGCCTTCTTCGCCTGGTTCTTCTCTTCCCGCCGGCGGGGGTTTGGTTTCGTCGCCTTCGAGTAATGGGGTTGATGGGAATTCGAGTGGTTTCAGCTTGGAGTTTGGGAATGGTGAGTTTAGTGGGCCTGAGTTGAAGAAGATCATGGCTAATGAAAAGCTTGCTGAGATTGCCATGTCCGATCCTAAGCGTGCAAAGAGGATTTTGGCTAATCGGCAATCAGCTGCACGATCCAAAGAACGGAAGATGCGTTACATTTCAGAGCTAGAACACAAGGTTCAGACTCTGCAGACTGAGGCCACGACACTCTCTGCACAGCTTACTCTGTTGCAGAGAGATTCTGTTGGACTCACTAACCAGAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTAAATGAGGCTCTAACTGCTGAGGTTCAAAGACTCAAGCTCGCTACAGCTGAGCTGAATGGGGAGTCACACCCTTCAAGCTGCTTGATTCCACCACATTCTGTCAACCCTCTGATGTTCCAGCAGCAGGCTCCTACCGCGTCTCAACAAAACATTCATCTTCAACAACAGCAGCTTCAGCATCAGCCACAGCAGCAGAATGGTAATGGCAACTCTCAGACCGACTTAAAACAATAG 1104 0.4792 MIKKEDSEGSGEKKFSPEGEVVDDLFSAYMNLDNINDALNNNNSSDEKNGTENNDLDSRASGTKTNNTGGGGGDSSDNEAESSVNEQEGGGVKRSAGGDVAAAAAAAAAATSSGSRHYRSVSMDSFIGKLSFSDHESLLSLPPSKMMMMPPSSPGSSLPAGGGLVSSPSSNGVDGNSSGFSLEFGNGEFSGPELKKIMANEKLAEIAMSDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGESHPSSCLIPPHSVNPLMFQQQAPTASQQNIHLQQQQLQHQPQQQNGNGNSQTDLKQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3228 367 MobiDBLite consensus disorder prediction 332 367 - -
Dod03g3228 367 MobiDBLite consensus disorder prediction 150 172 - -
Dod03g3228 367 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g3228 367 Coils Coil 228 262 - -
Dod03g3228 367 CDD bZIP_plant_RF2 213 262 IPR044759 GO:0003700|GO:0006355
Dod03g3228 367 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 18 356 - -
Dod03g3228 367 Coils Coil 291 311 - -
Dod03g3228 367 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 18 356 - -
Dod03g3228 367 MobiDBLite consensus disorder prediction 35 115 - -
Dod03g3228 367 Pfam bZIP transcription factor 212 266 IPR004827 GO:0003700|GO:0006355
Dod03g3228 367 Gene3D - 211 264 - -
Dod03g3228 367 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 273 IPR004827 GO:0003700|GO:0006355
Dod03g3228 367 SUPERFAMILY Leucine zipper domain 212 263 IPR046347 GO:0003700|GO:0006355
Dod03g3228 367 MobiDBLite consensus disorder prediction 35 89 - -
Dod03g3228 367 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3228 Dod-Chr3 64877707 64881258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3228 1 331 bZIP Transcription Factor Family AT4G38900 58.772 8.35e-106 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod03g3228 bZIP_1 4.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3228 - - aip:107628829 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3228 03 64877707 64881258 Dod03g3228 03 64877707 64881258 ECH