Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3215 ATGCGAACCCTCTGTGACGTATGCGAAAGCGCCGCTGCAATACTCTTCTGCGCCGCAGATGAGGCTGCTCTGTGCCGTGCTTGTGATGATAAGGTCCATATGTGTAACAAACTTGCTAGTAGACATGTTCGGGTTGGGCTTGCTGACCCCACGGATGTTCCACATTGTGACATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGCTATGTCTGCAATGTGATATGATTGTACATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTGTTGAGGCAGAGAGTTGAGTTTACAGGTGACAAAACTGGTCGAATGGAAGAATTGGGGCTGCAAACCATCGATCAGAATGAATCAAGAAAGGACCAAAGTCAGCCAGTTAAGCTGATAACAAGAGACAGTCACCAGAATCACGGGATCACGACTGTTCCATCTGTTCCAATGCTAGAAGATAACAATGATGGTCACGGAAAAATGGATAAAAAGTTAATTGATCTTAATACGAGGCCACAACGGTTAAATGGGCCTGCATCAAGCAACCGGGTAATTGATCTTAACACTTAG 579 0.4421 MRTLCDVCESAAAILFCAADEAALCRACDDKVHMCNKLASRHVRVGLADPTDVPHCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRVEFTGDKTGRMEELGLQTIDQNESRKDQSQPVKLITRDSHQNHGITTVPSVPMLEDNNDGHGKMDKKLIDLNTRPQRLNGPASSNRVIDLNT* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3215 192 CDD Bbox1_BBX-like 4 47 - -
Dod03g3215 192 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 186 - -
Dod03g3215 192 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Dod03g3215 192 CDD Bbox1_BBX-like 56 96 - -
Dod03g3215 192 Gene3D Classic Zinc Finger 2 96 - -
Dod03g3215 192 SMART bboxneu5 51 96 IPR000315 GO:0008270
Dod03g3215 192 SMART bboxneu5 1 47 IPR000315 GO:0008270
Dod03g3215 192 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Dod03g3215 192 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Dod03g3215 192 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 186 - -
Dod03g3215 192 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3215 Dod-Chr3 64750105 64751977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3215 1 192 C2C2-CO-like Transcription Factor Family AT4G38960 59.896 4.44e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Dod03g3215 zf-B_box 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3215 - - gmx:100527369 308.531