Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3209 ATGGAAGTTGTGGTGGCGGAAGCGTTGAAGCCAAGCTTGAGGGGAGAGCTTATTTTCCAGCAACCACTTGCAGTCACCGAGGAGATTCTGTGCTTCAACTCTAACAACGTTGTTGTCTCTAACAACGTTGTTGTTGGTGAGGATTTCTCCGTGGACGACCTCCTTGACTTTTCTAACGGCGAATTCCAACATGTCGGAAAAGGGATTAATAATCTCTTCGAAGAAGAAGAAGAGGAGGATGAGGAAAAAGACAGAACCTCAGGTTCCTCATCACAGGACCGCACATCAGAAGAAGACAGCAACTCCAATTCCACCGGCGCCGGAGACTCCGACTACATTTTCGCCGGCGAATTGGCCGTTCCGGACGATGATTTGGCTGACCTGGAATGGGTTTCTCACTTTGTGGACGATTCAATACCGGAGCTCTCTCTTTTGTACCCTGTCCCTTCCGGGCCGACAAAGGCCCGGGCCGAGCATGAACCCAAACCGGGCTCAGTAGATACTCCTAATCTTCCATCTGAAGTTCCTGTCAAGCCCAGGAGCACCAAGACCAGAAAGCCGAACCGTCGATTCTTGACCTTCAACACCATGCTCTCGCCTCCCTCTTCGCCGTCTTCGTGCTCCTCCCTGTTGTCCTCGACGGCGGCGCCCGTGTTCGCGGGTGAGCCGCCGGCGAAGAAGCAGAAGAGAAAGCCGGAGGGCCAAGCCTGTGGGCCCCAGTTTCAGCGACGGTGCACTCATTGCCAGGTGCAGAAAACCCCGCAGTGGAGGACGGGCCCGTTGGGCCCGAAAACACTCTGCAACGCTTGCGGAGTTCGGTATAAGTCGGGCAGGCTTTTCCCGGAGTACAGGCCCGCATGCAGCCCGACGTTCTCCGGGGATATTCACTCGAACAGCCACCGTAAGGTCTTGGAAATGAGGCGCAGGAAGGAAATGACTGGACCGGAGCCCGGTCTGGACCTGGCCCAAATGATCCCAGGTCGCTGA 987 0.5562 MEVVVAEALKPSLRGELIFQQPLAVTEEILCFNSNNVVVSNNVVVGEDFSVDDLLDFSNGEFQHVGKGINNLFEEEEEEDEEKDRTSGSSSQDRTSEEDSNSNSTGAGDSDYIFAGELAVPDDDLADLEWVSHFVDDSIPELSLLYPVPSGPTKARAEHEPKPGSVDTPNLPSEVPVKPRSTKTRKPNRRFLTFNTMLSPPSSPSSCSSLLSSTAAPVFAGEPPAKKQKRKPEGQACGPQFQRRCTHCQVQKTPQWRTGPLGPKTLCNACGVRYKSGRLFPEYRPACSPTFSGDIHSNSHRKVLEMRRRKEMTGPEPGLDLAQMIPGR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3209 328 PANTHER GATA TRANSCRIPTION FACTOR 1 326 - -
Dod03g3209 328 PANTHER GATA TRANSCRIPTION FACTOR 1 326 - -
Dod03g3209 328 MobiDBLite consensus disorder prediction 74 109 - -
Dod03g3209 328 Pfam GATA zinc finger 245 278 IPR000679 GO:0006355|GO:0043565
Dod03g3209 328 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 242 302 - -
Dod03g3209 328 SMART GATA_3 239 293 IPR000679 GO:0006355|GO:0043565
Dod03g3209 328 Gene3D - 239 312 IPR013088 GO:0006355|GO:0008270
Dod03g3209 328 ProSitePatterns GATA-type zinc finger domain. 245 270 IPR000679 GO:0006355|GO:0043565
Dod03g3209 328 CDD ZnF_GATA 244 301 IPR000679 GO:0006355|GO:0043565
Dod03g3209 328 PIRSF Txn_fac_GATA_plant 26 322 IPR016679 GO:0003677|GO:0005634|GO:0045893
Dod03g3209 328 MobiDBLite consensus disorder prediction 309 328 - -
Dod03g3209 328 ProSiteProfiles GATA-type zinc finger domain profile. 239 275 IPR000679 GO:0006355|GO:0043565
Dod03g3209 328 MobiDBLite consensus disorder prediction 150 184 - -
Dod03g3209 328 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3209 Dod-Chr3 64707411 64710134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3209 8 320 C2C2-Gata Transcription Factor Family AT5G66320 40.588 1.02e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod03g3209 GATA 6.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3209 - - adu:107476627 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3209 03 64707411 64710134 Dod03g3209 03 64707411 64710134 ECH