Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3193 ATGGGAGAGGTGGCACGTGGCGGCGGTTGTTGCCCTCCGATGGATCTGTTCCGCTCGGAGCCGATGCAGCTCGTTCAGCTCATCATCCCTATGGAATCCGCTCATCTCACTGTCTCATATCTCGGAGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATTCAGACAAGAGCCCTTTTCAGCGGACTTATGCGATTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTGCGTTACTTCAAGGAGCAAATGTTGAAGGCAGGTGTTTCACCAACAAATTCCACATCACATGTTGATGTGAACATCGATGACCTTGAGGTAAAACTTACAGAAATTGAATCAGAGTTATCTGAGATGAATGCGAATGGTGAAAAGTTGCAACGCTCGTACAATGAACTTGTGGAGTATAAGCTCGTTCTGCAGAAGTTAATACTTCCTTTAAGGGTTGCTAAGTATCAGGAGGCAAATCCTACTGTGTATACCGTAGTTACCTTTCCAGTTTCTTTTTGCCGTAATGTTTGGTGA 525 0.4495 MGEVARGGGCCPPMDLFRSEPMQLVQLIIPMESAHLTVSYLGDLGLLQFKDLNSDKSPFQRTYAIQIKRCGEMARKLRYFKEQMLKAGVSPTNSTSHVDVNIDDLEVKLTEIESELSEMNANGEKLQRSYNELVEYKLVLQKLILPLRVAKYQEANPTVYTVVTFPVSFCRNVW* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3193 174 PANTHER VACUOLAR PROTON ATPASES 147 170 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dod03g3193 174 PANTHER VACUOLAR PROTON ATPASES 7 142 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dod03g3193 174 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 147 170 - -
Dod03g3193 174 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 7 142 - -
Dod03g3193 174 Coils Coil 102 129 - -
Dod03g3193 174 Pfam V-type ATPase 116kDa subunit family 40 142 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3193 Dod-Chr3 64521357 64527349 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3193 13 142 Primary Pumps ATPases(2) AT4G39080 74.809 1.54e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3193 K02154 - gmx:100810062 252.292