Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3192 ATGAGTTCTTTTCGGTCCCAGTTTGAACTCTTCGGTCCCTCTGCATATGAATGCAGTGACCTTTCTTGCAGTGAGGCTACAACTGTGGGTCTGATAAAAGTGCGTCGCGCTTACCCATTTGGAGTGGATCCTGTATGGCATGGTTCACGAAGTGAATTACCATTTCTAAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATTGCAATGCCAGATTCTTTCGGAGCAGCGTAAATGTGTGGTTCCAATTTATTCCCCAGATGATATTTCTCAATAGTCTATTTGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACTGGTTCTCAAGCTGATTTGTACCATGTAATGATCTACATGTTCCTGAGCCCGACAGATGAGTTGGGTGAGAACCAACTCTTTGTTGGTCAGAAAAATTTGCAGCTTGTGCTTTTGCTTCTGGCTCTTGTCTCCGTGCCCTGGATGCTGCTCCCAAAACCTTTTATTTTGAAGAGTCAACACCAAGCTAGGCACGGGGCTGAATCCTACACACCACTTGATACCACGGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGTCATGAAGAATTTGAGTTCAGTGAAGTCTTTGTGCATCAACTCATACACACCATAGAATTTGTTCTTGGAGCAGTCTCTAATACAGCTTCTTACCTTCGTCTCTGGGCCCTTAGTCTTGCCCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGGTTCTGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGTCTCATTGTCTTCATTTTCGCAACTGTTGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTACATGCTTTGCGACTTCACTGGGTCGAGTTCCAAAACAAGTTTTATGAGGGCGATGGTTACAAGTTCTACCCTTTCTCGTTTGCATTGCTAGATGAGGAGGAGGACTGA 1005 0.4358 MSSFRSQFELFGPSAYECSDLSCSEATTVGLIKVRRAYPFGVDPVWHGSRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNARFFRSSVNVWFQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDELGENQLFVGQKNLQLVLLLLALVSVPWMLLPKPFILKSQHQARHGAESYTPLDTTEESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLVLAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPFSFALLDEEED* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3192 334 Pfam V-type ATPase 116kDa subunit family 6 326 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dod03g3192 334 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 333 - -
Dod03g3192 334 PANTHER VACUOLAR PROTON ATPASES 4 333 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3192 Dod-Chr3 64518505 64520566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3192 4 334 Primary Pumps ATPases(2) AT2G21410 80.363 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3192 K02154 - gmx:100810062 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3192 03 64518505 64520566 Dod03g3192 03 64518505 64520566 ECH