Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3186 ATGAGAACGTCCTTGTGCCATACACTGTTGAGTGTGTCCTTCATTTGGCTGCATGCAACAACACTAACAGTGCTGTGCACTTCATTCAGCGACCTTGATGCGCTGCTGAAGCTCAAGGAAGCCATGAAGGTGCCCATCAAAGCCAAATCCGACGCGCTTCAAGATTGGAAATTCTCCACCTCTCTCTCCGCACACTGTTCATTCTCCGGCGTCACTTGCGACCCCGAGAACCTCCGCGTCACAGCCCTGAACGTGTCGTTCCTCCCTCTTTTCGGCAACGTTCCGCCGGAGATCGGCCTCCTGGACAAGCTCGAGAGCCTCACCATCGCGCGGAACAACCTCACCGGCGAGCTCCCGAAGGAGCTCGGAAAACTCACCTCCCTCAAGCTCCTCAACATCTCGCACAACACCTTCTCCGGCCCCTTCCCCGGCGAAATCACTATCAGCATGAGGGAACTCGAATCCCTCGATGCCTACGACAACAACTTCAACGGAACGCTTCCGGAGGAAGTCGTCAAGCTGGAGAAGCTAAAGTACCTCCGTCTCGACGGAAACTACTTCTCCGGCGAGATACCGGAGAGTTACTCTGAGTTTCAGAGCTTGGAGTATCTGAACCTAGCCACCAACAGCTTAACAGGCAAGATTCCGAAGAGTTTGGCAAAGCTTAAGACGCTTAAACAACTCTATCTCGGCTACAACAATGCCTACGACGGTGGAATTCCAGAAGAGCTGGGTTCGTTGGAGTCGTTGCAACGGCTTGATCTTTCTAGTTGCAACCTGAGCGGTGAGATTCCTCCTACTCTCGGAGCATTAACTAACTTGGACTCACTTTTCTTGCAAATGAACAACCTCACGGGTACAATCGCTTCTGAACTCTCAACCATGATCAGCCTCATGTCATTGGATCTCTCCATCAACGAACTCACCGGCGAGATTCCGCAGAGTTTCGCGAAGCTCACGAACCTCACGCTCATCAACTTCTTCCAGAACAAGCTACGTGGCACAATCCCCGGGTTCGTAGGGGACCTCCCGAACCTCGAGACGGTCCAGCTTTGGGAGAACAACTTCTCCTACGTGCTTCCCCCGAACCTCGGGCAGAACGGGAAGCTGAAGTTCTTCGACGTCACGAAGAACCACCTCACCGGCAAGATCCCTAGTGATCTCTGCAAAGGGGGTAGGTTGCTAACGTTCATCCTCACCGATAACTTCTTCGACGGCCCTATCCCCGAGGGAATCGGCGAATGCAAGTCCCTTCAGAAGATACGCATCGCCGATAACTTCTTAGAAGGGCCGGTTCCTCCAGGGATTTTTAAACTGCCAGCCGTCGAGCTCATGGAGCTGGGGAATAACCGTTTTAACGGCCAACTACCTTCCGAGATTTCCGGCGAGAAACTCGGGATCCTAACGCTCTCCAATAACAGATTCACGGGGAGGATACCACCGGCGGTTAAAAACCTCAGGAGCCTGCATACGCTGTCGCTCGACGCGAACCAGTTCGTTGGCGAGATACCCGGGGAGGTGTTCGACCTGCCGGCGTTGACCAAGGTCAACATGAGCGGCAACAACCTCACCGGGCAGATCCCAACGGCGCTGACACGCTGCGTTTCGCTCACAGCCGTTGATCTGAGCCGGAACATGCTGATCGGCGAGGTTCCCAAGGGAATCAAGAACCTCAAAGATCTAAGCATTTTTAACCTCTCAAGGAACCACATCTCGGGGCCTGTCCCCGACGAGATTCGGTTCATGATTAGCCTCACAACTCTCGATCTCTCCAACAACAATTTCATTGGAAGAGTCCCCACGGAAGGTCAGTTTTTAGTCTTCAGCGACAAATCCTTTGCGGGGAACCCTAACTTATGCTCTGCTCACCAGCGCACTTGCCCTTCCTTGGTGTACCCGTACGACAGCTTGAACAAGATCCACAACCCTCTTCCGAAGCCAACGAAGGTGGTTATCATCGTGATCGCGCTCGCCACCGCGGTGCTCCTCGTTCTGGTGACGGTGTACATGATGAGGAAGAGGAAGATCCAGAGGTCAACGGCGTGGAAGCTAACGTCGTTCCAGAAGCTGGACATGAAGGCGGAGGACGTGGTGGAGTGCTTGAAGGAAGAGAACATCATAGGGAAAGGTGGGGCTGGGATCGTGTACCGCGGGACCATGCCAAACGGAAGTGACGTGGCGATCAAACGGTTGGTAGGACAGGGAAGCGGAAGGACCGATTACGGTTTCAAGGCGGAGATTGAAACTTTGGGAAGGATAAGGCACAGGAACATAATGAGGCTTCTAGGGTATGTTTCGAACAAGGACACGAACTTGTTGTTGTATGAGTACATGCCGAATGGGAGCTTGGGGGAGTGGCTGCATGGGGCGAAGGGAGGGCACTTGACGTGGGAGATGAGGTACAGGATCGCGGTGGAGGCGGCGAAGGGGCTGTGCTACTTGCACCATGACTGTTCGCCGCTGATTATTCACAGGGACGTGAAGTCCAATAATATATTGCTGGATGGGGACTTTGAAGCGCATGTGGCGGATTTTGGACTCGCCAAGATCTTGCAGGACCCAGGAGCCTCTCTGTCCATGTCCAATATCGCTGGCTCCTACGGCTACATTGCTCCAGAGTATGCTTACACACTGAAAGTGGACGAGAAAAGCGACGTGTATAGCTTTGGCGTAGTGCTGTTGGAGCTGATAGTAGGAAGAAAGCCTGTGGGTGAGTTTGGAGATGGGGTGGACATCGTGAGATGGGTCAAGGAAACCACAATGGAGCTCTCTCAGCCGTCCGATGCAGCATCAGTGTTGGCAGTGGTGGACACAAGGCTCACTGGGTACCCATTGACAAGCGTCATCCACATGTTCAACATAGCTATCATGTGTGTCAAGGAAATTGGGCACGCTAGGCCTACCATGAGGGAAGTCGTCCACATGCTCACAAATCCTCCTCAGTCTACTACTCATCACAACCTAATTAATCTCTAG 2976 0.5323 MRTSLCHTLLSVSFIWLHATTLTVLCTSFSDLDALLKLKEAMKVPIKAKSDALQDWKFSTSLSAHCSFSGVTCDPENLRVTALNVSFLPLFGNVPPEIGLLDKLESLTIARNNLTGELPKELGKLTSLKLLNISHNTFSGPFPGEITISMRELESLDAYDNNFNGTLPEEVVKLEKLKYLRLDGNYFSGEIPESYSEFQSLEYLNLATNSLTGKIPKSLAKLKTLKQLYLGYNNAYDGGIPEELGSLESLQRLDLSSCNLSGEIPPTLGALTNLDSLFLQMNNLTGTIASELSTMISLMSLDLSINELTGEIPQSFAKLTNLTLINFFQNKLRGTIPGFVGDLPNLETVQLWENNFSYVLPPNLGQNGKLKFFDVTKNHLTGKIPSDLCKGGRLLTFILTDNFFDGPIPEGIGECKSLQKIRIADNFLEGPVPPGIFKLPAVELMELGNNRFNGQLPSEISGEKLGILTLSNNRFTGRIPPAVKNLRSLHTLSLDANQFVGEIPGEVFDLPALTKVNMSGNNLTGQIPTALTRCVSLTAVDLSRNMLIGEVPKGIKNLKDLSIFNLSRNHISGPVPDEIRFMISLTTLDLSNNNFIGRVPTEGQFLVFSDKSFAGNPNLCSAHQRTCPSLVYPYDSLNKIHNPLPKPTKVVIIVIALATAVLLVLVTVYMMRKRKIQRSTAWKLTSFQKLDMKAEDVVECLKEENIIGKGGAGIVYRGTMPNGSDVAIKRLVGQGSGRTDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGGHLTWEMRYRIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDGDFEAHVADFGLAKILQDPGASLSMSNIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVRWVKETTMELSQPSDAASVLAVVDTRLTGYPLTSVIHMFNIAIMCVKEIGHARPTMREVVHMLTNPPQSTTHHNLINL* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3186 991 Gene3D Ribonuclease Inhibitor 235 340 IPR032675 -
Dod03g3186 991 Gene3D Transferase(Phosphotransferase) domain 1 778 988 - -
Dod03g3186 991 SMART serkin_6 701 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3186 991 Pfam Leucine Rich Repeat 249 270 IPR001611 GO:0005515
Dod03g3186 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Dod03g3186 991 Pfam Leucine rich repeat N-terminal domain 30 74 IPR013210 -
Dod03g3186 991 Gene3D Ribonuclease Inhibitor 343 630 IPR032675 -
Dod03g3186 991 PANTHER UNNAMED PRODUCT 13 983 - -
Dod03g3186 991 SUPERFAMILY RNI-like 83 427 - -
Dod03g3186 991 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 13 983 - -
Dod03g3186 991 Pfam Leucine Rich repeat 584 597 IPR001611 GO:0005515
Dod03g3186 991 Gene3D Ribonuclease Inhibitor 30 147 IPR032675 -
Dod03g3186 991 SUPERFAMILY L domain-like 326 645 - -
Dod03g3186 991 SMART LRR_typ_2 582 607 IPR003591 -
Dod03g3186 991 SMART LRR_typ_2 486 510 IPR003591 -
Dod03g3186 991 SMART LRR_typ_2 247 271 IPR003591 -
Dod03g3186 991 SMART LRR_typ_2 343 367 IPR003591 -
Dod03g3186 991 SMART LRR_typ_2 295 318 IPR003591 -
Dod03g3186 991 SMART LRR_typ_2 101 125 IPR003591 -
Dod03g3186 991 ProSiteProfiles Protein kinase domain profile. 701 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3186 991 Pfam Leucine rich repeat 487 547 IPR001611 GO:0005515
Dod03g3186 991 Pfam Leucine rich repeat 176 234 IPR001611 GO:0005515
Dod03g3186 991 Gene3D Phosphorylase Kinase; domain 1 666 777 - -
Dod03g3186 991 Gene3D Ribonuclease Inhibitor 148 234 IPR032675 -
Dod03g3186 991 Pfam Protein tyrosine and serine/threonine kinase 702 973 IPR001245 GO:0004672|GO:0006468
Dod03g3186 991 SUPERFAMILY Protein kinase-like (PK-like) 693 976 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3186 Dod-Chr3 64482557 64487484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3186 26 985 Receptor kinase-like Gene Family AT1G75820 62.955 0.0 1229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g3186 PK_Tyr_Ser-Thr 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3186 K00924 - gmx:732625 1521.91