Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3183 ATGATGATGGAAAAGAGAAATTTTTCTGAATTCATGTCAGAACTAATAGTTCTGGCAGATGAGGTTGCTTCCTTTCCTAAGCACACTGAAATTGAGATAGATGCTTTTACTGAGTTTGCCATGTTGGTTGAGAAATTGGCACCAATTTTCAATGATTGGAGGGACAGAAGCACAATCATGGACAAGCCTTCCATTAGAAAATCATTGGATTCTCTTGAGATTGCGCTTAGCCGTGCTAAGGCTTTGGCAAAAAGCACCAATTGGAAAGACCCCATCAAACAAATTGAGGACATAACACATGATATTGGTCGATCATTAGGCCTAATGCTTGTGGCCAGCCTTGAAGTGTCCACAGATTTTAGAGAGGAGATTGGTACATTGCAAAAAGAGTTTATGAATGCAAGGTTTGTTGGGAATATTAGCATACCTTCAAGTCCCATGTCAGAGTTTGTCGGTGATGTGAACGTGGGAGCGGAAACTGAGGAGGAAGGGGAAATTGAAGAGGAAATAGTTAATGTTACTATTGAAGATGTTGTACTTCAACTTAAGAATGGTAGTGATGAAGAGCTTGCAGTTGCACTTTTGAGGCTAAAGAAGTTCATCCAGGATGAGCAACTTGATAGTTGTTTGGTTAATGAGGAAGCTGTCGTTGCCGTTCTTTTCAAACGATTATGTTCGTCTAAGGCAGATAATAGGCTGACCATTATTCAATTACTACGAACTATTGCTTTGAGAAATGATGAGACAAAGGAGAAGATGACAGATACTGAGTTTTTATCAGCAGTGGTGAAGTCTCTAACAAGGGATGCAGAAGAGAGGAGGCAAGCAGTGGGACTCTTGCTAGAGCTCTCTGATGTTCCCGCAGTTCGGCGGCAGATTGGAAGAATTCAGGGATGTATTGTTATGTTAGTTTCTATCCTTAATGGAATCGACCCTGTTGCTTCGCAAGATGCAGCCAAGTTGTTGGATATATTGTCTAGTAATACTCAAAATTCACTTCATATGGCTGAGGCTGGTTACTTTAAGCCACTAGTGCATTATTTGAAGAAAGGCTCCGACATGAACAAGATCCTTATGGCAACAGCACTTTCTAGGTTGGTGCTTACTGATCACAGCAAACTTTCCCTCGGAGAAGATGGGGCAATTGAGCCCCTTGTGAACATGTTTCATACTGGGAAACTTGAGTCCAAGTTGTCTGCACTAAATGCATTGCAAAATCTTTCCAGCGTGACAGAAAACGTGCAACTCTTGATCAGATCTGGCATTGCAGGATCTCTACTGCAACTTCTTTTCTCAGTAACATCTGTGCTCATGACTCTTCGGGAGCCGGCATCAGCTATTCTTGCTAGAATTGCTCAGTCAGAATCCATTCTTGTCAATCAAGATGTGGCTCAGCAGATGCTTTCACTCTTGAACCTTTGCAGCCCGGTAATTCAAGGCCATCTCTTAGAAGCTCTAAACAGCATCGCTGCACATCCTCGTGCATCCAAAGTGAGAAGAAAAATGAAGGAAAAAGGTGCCCTTCAGCTAATATTACCCTTTCTGAAGGAACCTAACACTCAAATAAGAGGCAAAGCCCTTAGTTTGCTGTATACTCTCTCCAAAGATCTTACGGACGAGTTGAGTGAACATCTTGATGAAGCTCATCTTATTAACATTGTTAATATTGTCTCATCATCATCAGATAGTGAAAAGGCTGCTGCTGTCGGCATACTGAGTAATCTTCCTGTTAGTGATAAAAAGGTGACAGAGGTGCTTAAGAGGGCAAACCTGCTGCCCATTTTAATATCCATTATGGATTCAAGCACAGGAAGTAACTCAACCACCCCAAGTAGCTTAGCTGAAAGCATTGCATGTGTTATGATCCGGTTCACAAGTTCCACCGACAAGAAACTGCAGCTTTTTTCAGCTGAACATGGGGTGATTCCATTGCTTGTAAAACTGCTCTCAACTGGCTCAGCAATCACAAAATTCAGAGCCGCGACCGCTTTGGCTCAACTGTCACAAAACTCTCTGTCTCTCAGGAGGTCCAGGAAGTCAAGGTGGTTGTGTGTTAATCCCTCAGTGAATGCATATTGTGAAGTTCATGATGGCTATTGCTTTGTGAGCACCACATTTTGTCTGGTCAAGGCTGGTGCTGTTTCTCCGCTCATCAAGATACTGGAAGATAAGGAGTGGGAAGCAGTTGAGGCTGCTCTTAGTGCCCTTTCAACTCTCTTGCTAGATGAAATCTGGGAAGGTGGTGTCAATTGCATAGCCAAAAATTCAGGTGTACAAGCTATTGTTAAAATTTTAGAAGCAGGTGATGTGAAGGTCCAAGAAAAAGCACTATGGATGTTGGAGAGAATATTCAGGTTTCAAGAGTACAGAGTAAAATATGGGGAATCAGCTCAGGTTTTTCTTATTGATATGGCACAGACTTGTGATTCTAGATTGAAGTCAACTGTTGGAAAAGTTTTGGCAGAGCTGGAGCTCCTGCAAGTTCAATCAAGTTATTTCTGA 2502 0.4217 MMMEKRNFSEFMSELIVLADEVASFPKHTEIEIDAFTEFAMLVEKLAPIFNDWRDRSTIMDKPSIRKSLDSLEIALSRAKALAKSTNWKDPIKQIEDITHDIGRSLGLMLVASLEVSTDFREEIGTLQKEFMNARFVGNISIPSSPMSEFVGDVNVGAETEEEGEIEEEIVNVTIEDVVLQLKNGSDEELAVALLRLKKFIQDEQLDSCLVNEEAVVAVLFKRLCSSKADNRLTIIQLLRTIALRNDETKEKMTDTEFLSAVVKSLTRDAEERRQAVGLLLELSDVPAVRRQIGRIQGCIVMLVSILNGIDPVASQDAAKLLDILSSNTQNSLHMAEAGYFKPLVHYLKKGSDMNKILMATALSRLVLTDHSKLSLGEDGAIEPLVNMFHTGKLESKLSALNALQNLSSVTENVQLLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIAQSESILVNQDVAQQMLSLLNLCSPVIQGHLLEALNSIAAHPRASKVRRKMKEKGALQLILPFLKEPNTQIRGKALSLLYTLSKDLTDELSEHLDEAHLINIVNIVSSSSDSEKAAAVGILSNLPVSDKKVTEVLKRANLLPILISIMDSSTGSNSTTPSSLAESIACVMIRFTSSTDKKLQLFSAEHGVIPLLVKLLSTGSAITKFRAATALAQLSQNSLSLRRSRKSRWLCVNPSVNAYCEVHDGYCFVSTTFCLVKAGAVSPLIKILEDKEWEAVEAALSALSTLLLDEIWEGGVNCIAKNSGVQAIVKILEAGDVKVQEKALWMLERIFRFQEYRVKYGESAQVFLIDMAQTCDSRLKSTVGKVLAELELLQVQSSYF* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3183 833 Gene3D - 698 827 IPR011989 -
Dod03g3183 833 SMART arm_5 246 285 IPR000225 GO:0005515
Dod03g3183 833 SMART arm_5 328 368 IPR000225 GO:0005515
Dod03g3183 833 SMART arm_5 369 409 IPR000225 GO:0005515
Dod03g3183 833 SMART arm_5 701 741 IPR000225 GO:0005515
Dod03g3183 833 SMART arm_5 745 785 IPR000225 GO:0005515
Dod03g3183 833 SMART arm_5 629 669 IPR000225 GO:0005515
Dod03g3183 833 SMART arm_5 287 327 IPR000225 GO:0005515
Dod03g3183 833 SMART arm_5 495 535 IPR000225 GO:0005515
Dod03g3183 833 Gene3D - 179 363 IPR011989 -
Dod03g3183 833 Gene3D - 364 680 IPR011989 -
Dod03g3183 833 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 3 833 - -
Dod03g3183 833 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 380 422 IPR000225 GO:0005515
Dod03g3183 833 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 3 833 - -
Dod03g3183 833 SUPERFAMILY ARM repeat 342 787 IPR016024 -
Dod03g3183 833 SUPERFAMILY ARM repeat 174 432 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3183 Dod-Chr3 64437638 64441298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3183 216 833 U-box Gene Family AT1G76390 28.916 1.06e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3183 K08332 - gmx:100791453 1146.34