Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3151 ATGGCCTCAAGCTCGCTCAGCAAAGAAAAGCCTTCTGACTCCACTTGGACACCAAAACAAAACAAGCTGTTTGAGAGGGCACTTGCAAAATATGATAAGGACACCCCTGACCGCTGGCAGAATGTGGCCAAAGCAGTTGGTGGCAAATCTGCTGATGAAGTTAAGAGACACTATGAAATCCTCTTGGAGGATCTCAGACACATTGAGTCTGGCCGTGTCCCTATTCCAAACTACAAGTCCACAGGAAGCAGCACTAATGTTGATGAGGAACAAAGGCTTCTGAAGTATCTTAAGCTGAACTGA 303 0.462 MASSSLSKEKPSDSTWTPKQNKLFERALAKYDKDTPDRWQNVAKAVGGKSADEVKRHYEILLEDLRHIESGRVPIPNYKSTGSSTNVDEEQRLLKYLKLN* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3151 100 CDD SANT 15 62 IPR001005 -
Dod03g3151 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Dod03g3151 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Dod03g3151 100 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Dod03g3151 100 Gene3D - 7 75 - -
Dod03g3151 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Dod03g3151 100 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Dod03g3151 100 SMART sant 12 64 IPR001005 -
Dod03g3151 100 Pfam Myb-like DNA-binding domain 15 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3151 Dod-Chr3 64150493 64152624 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod03g3151 Myb_DNA-binding 7.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3151 - - gmx:100798314 188.348