Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3147 ATGAGAAAGGGCAAGTTTGGAATTACATATGCTACTAACTTGGTTAATAGGTTGCAAGGTTTCATTGACTATGTCATGATTGAAGCTGCCAGCTTGAAAAGGTTGCCGGAATATTCACAGTCCAGCTTCAATTTGCGCGCTAAAACTGTCATTGAGGACTCTCAGGTTGTGCCACTTATTAGATGGTTGAAGCATAATGCACTATCATATCCTGAGATATCAAAGCTCATTTTGATGTCAAGAGGAAGAATTGAGTCCATAAGGGACCGTATTGAGTGGTTGAAGACGATACATGTGAAAGGGGACTTTCTTGGGTATGCACTTGTGAAGGCTGGAGAGAATATCTTGCAACGCAGCGATGAGGAACTGGATGAGATTGTTGAGTATTTGGAGTCCAACGGAGTCAGGAGGGATTGGATGGGTTATGTCGTGAGTCGATGTCCTCAATTGTTGTCCTTCAGCTTAGAAGAAGTGAAGACTCGTGTGGCGTTCTATGTAGATATGGGTTTAAATGAGAATGATTTTGGCACAATGGTTTTTGATTTTCCTAGAGCACTTGGTTACTTTACCCTGGAAGAAATGAACCAAAAGGTTAGTTACTTGAAAGAATTTGGGCTTGGAAATGAGGCTGTTGGCAAGTTGCTGGCATTTAGGCCACAATTGATGGGGTGCAGCATTGATGAACAATGGAAACCTCTTGTTAAGTATTTGTATTATCATGGAATCACCCGAGATGGCATGAGGAGAATGCTTACCCTTAAACCAATAGTCTTTTGTACTGACTTGCAGATGAATATTCTCCCAAAGGTAAAGTTTTTCCAGGACATAGGGGTTCGAGATGATGCAATTGGCAACATGCTTGTAAAGTTTCCTACTCTAATCACTTACAGCCTCCACAAGAAGATTAGGCCAGTGGTCATTTTCTTGTTGACCAAGGCTGGAGTCACTGAGAAAGATATCGGCAAGGTTGTAGCTCTGGGACCTGAGCTCTTGGGATGCAGCATTGTACACAAGCTTGATGTAAATGTAAAATATTTTTTGTCTCTTGGCATACGTCAGAAGCAACTGGGTGAGATGATTGCTGATTTCCCACTCTTGCTAAGATACAACATAGATGTCCTTCGTCCCAAGTATGTTTATTTGCGGAGAACCATGATCCGGCCTTTGCAAGATATCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAAGGCCGAATTATCCCAAGACACAAGGTTCTTGTGGAGAATCAGATTAATATTAAGCTCAGATACATGCTGGCTAGCACTGATGAAGAATTCAAGAAATTGGTCAATGCTTTAATCAGAAAGCGCCAGAAATTTCAATCCTGGTGTCGTGGAGGAGGATACTCACCCTCAATCTGTTATTCCAGGGGATATTACTACAACTCAGACATAAAAATGCGTAAATAA 1434 0.4142 MRKGKFGITYATNLVNRLQGFIDYVMIEAASLKRLPEYSQSSFNLRAKTVIEDSQVVPLIRWLKHNALSYPEISKLILMSRGRIESIRDRIEWLKTIHVKGDFLGYALVKAGENILQRSDEELDEIVEYLESNGVRRDWMGYVVSRCPQLLSFSLEEVKTRVAFYVDMGLNENDFGTMVFDFPRALGYFTLEEMNQKVSYLKEFGLGNEAVGKLLAFRPQLMGCSIDEQWKPLVKYLYYHGITRDGMRRMLTLKPIVFCTDLQMNILPKVKFFQDIGVRDDAIGNMLVKFPTLITYSLHKKIRPVVIFLLTKAGVTEKDIGKVVALGPELLGCSIVHKLDVNVKYFLSLGIRQKQLGEMIADFPLLLRYNIDVLRPKYVYLRRTMIRPLQDIIEFPRFFSYSLEGRIIPRHKVLVENQINIKLRYMLASTDEEFKKLVNALIRKRQKFQSWCRGGGYSPSICYSRGYYYNSDIKMRK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3147 477 Pfam mTERF 86 167 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 Pfam mTERF 168 435 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 1 456 - -
Dod03g3147 477 Gene3D Transcription termination factor 3, mitochondrial 216 453 IPR038538 -
Dod03g3147 477 PANTHER CGI-12 PROTEIN-RELATED 1 456 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 357 387 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 321 352 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 212 243 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 284 316 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Dod03g3147 477 SMART mt_12 389 420 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3147 Dod-Chr3 64101727 64105790 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod03g3147 mTERF 6.7e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3147 K15032 - zju:107426883 737.258