Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3142 ATGGCGGTCTCCGGCAACTCCTCCGGCGACCCTCTCCCGGAGTTGAACACCTCGACACCGTTTCTCGGCCTGAAGCTCATCGTTTTGGTATCCGTTATCTTCCTCGCAATCGTTGTTACGATCTTGCTCATTGTCTTCCTCTGCTTTCGCCGTAGCAGAATAACATCGAAGAAGAAGCAGATGAGGATTCTCACGACGAAGCATAGCTCGGGAACAATCCCTCTGGTGTCGAAGGAGATCAACGTGGTGATGAAAGCAACGGATCTCGAACGAAGAACCTGCGAAACTGATGAACAAACAGCAACGATGGTTGAGATTGTTGAAGACGTTAGTGTTGTCGATGATGATGAACCGAAGAAGAAGATGAAGAAAGAGGAGGAATTGGGGATCAAAAGGAAGAGTGAGGGAGAAGGGAGTGAGGTGTCGGTGGAGGATCCGAACATAGGGTGGGGAAGATGGTATAGCCTGAGGGAGGTGGAGGTGGCGACACGAGGCTTCGCGGAAAAGAATGTGATTGGAGAAGGCGGCTATGGAATTGTCTACATGGGAGTTCTTCAAGATGGTTCTGTGGTAGCTGTCAAGAATCTTCTTAACAACAAGGGTCAAGCCGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTTGGCTTAGTAGGATATTGTGCAGAAGGCCCTAAAAGGATGCTTGTTTATGAATTTGTTAACAACGGAAATTTGGAGCAGTGGCTGCATGGTGATGTAGGACCAGTAAGCCCCTTGACCTGGGATATTCGAATGAAGATTGCCATTGGGACCGCAAAAGGACTAGCTTATTTGCACGAAGGTTTAGAACCCAAAGTTGTGCACCGAGATATAAAATCCAGTAACATCCTTTTGGACAAAAGTTGGAATGCCAAAGTCTCAGATTTTGGACTTGCCAAACTCTTAGGATCTGAGAAAAGCCATGTGACTACGCGTGTAATGGGAACATTTGGATATGTTTCACCAGAATATGCAAGCACGGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTTGGAGTTCTGCTCATGGAGATAATTACAGGAAGATGCCCCATTGATTATTCTAGACCACCTGGAGAGATGAATTTGGTTGATTGGTTCAAGGCAATGGTAGCAAGTCGTCGTGGCGATGAACTAGTCGATCCTTTGATTGAAGTTCAGCCCTCTCCAAGGTCTCTGAAGCGAGCTTTACTAGTTTGTCTGCGCTGCATAGATTTGGATGTTGTTAAGCGGCCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCAGATGATTTCCCCTATCGTTCTGAGCTTCGTACACTTAAAGAGAGAGATCATGCGCCTCCTTATGCAGATGTTTCCGGTAGAGTTCCTTACCCATCAAAGTATGCAGGAGCCGTAGAAAAATCAAGATGGAAATGA 1452 0.4607 MAVSGNSSGDPLPELNTSTPFLGLKLIVLVSVIFLAIVVTILLIVFLCFRRSRITSKKKQMRILTTKHSSGTIPLVSKEINVVMKATDLERRTCETDEQTATMVEIVEDVSVVDDDEPKKKMKKEEELGIKRKSEGEGSEVSVEDPNIGWGRWYSLREVEVATRGFAEKNVIGEGGYGIVYMGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPKRMLVYEFVNNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKSWNAKVSDFGLAKLLGSEKSHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRCPIDYSRPPGEMNLVDWFKAMVASRRGDELVDPLIEVQPSPRSLKRALLVCLRCIDLDVVKRPKMGQIVHMLEADDFPYRSELRTLKERDHAPPYADVSGRVPYPSKYAGAVEKSRWK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3142 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Dod03g3142 483 Gene3D Transferase(Phosphotransferase) domain 1 242 450 - -
Dod03g3142 483 MobiDBLite consensus disorder prediction 117 140 - -
Dod03g3142 483 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Dod03g3142 483 SMART serkin_6 166 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3142 483 SUPERFAMILY Protein kinase-like (PK-like) 145 438 IPR011009 -
Dod03g3142 483 MobiDBLite consensus disorder prediction 117 143 - -
Dod03g3142 483 Gene3D Phosphorylase Kinase; domain 1 128 241 - -
Dod03g3142 483 Pfam Protein kinase domain 167 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3142 483 CDD STKc_IRAK 172 438 - -
Dod03g3142 483 PANTHER OS01G0323000 PROTEIN 17 483 - -
Dod03g3142 483 PANTHER RECEPTOR-LIKE KINASE 17 483 - -
Dod03g3142 483 ProSiteProfiles Protein kinase domain profile. 166 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3142 483 MobiDBLite consensus disorder prediction 455 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3142 Dod-Chr3 64054171 64058234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3142 153 438 Trihelix Transcription Factor Family AT5G38560 49.315 2.90e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod03g3142 Pkinase 6.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3142 - - lang:109351508 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3142 03 64054171 64058234 Dod03g3142 03 64054171 64058234 ECH