Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3125 ATGACTGAGGGCAAAGCAGTTGAAGCAGGATCCCAGAATAAGGGTCTTGCGGATTTCGATCCTCAAAAGAAGCCTAAAAGGAACAAGTTCGCTTTCGCTTGTGCCATATTGGCTTCCATGACCTCCATCTTACTTGGCTATGATATTGGTGTGATGAGTGGAGCAGCTATATACATACAGAGAGACCTGAAAGTTTCGGACGTGCAAATCGAGATCCTGATGGGAATCATAAACCTGTACTCTCTGATAGGGTCCTGTCTCGCGGGAAGAACCTCGGATTGGATTGGTCGCAGGTACACGATTGTGCTTGCAGGGGCCATATTCTTCGCTGGGGCAATCTTGATGGGGTTCTCTCCAAACTACGCCTTCCTCATGTTTGGTCGTTTCGTGGCGGGCATTGGCATAGGATACGCACTCATGATCGCACCCGTCTACACCGCTGAGGTCTCCCCTGCTTCCTCTCGTGGCTTCTTCACCTCCTTCCCAGAGGTTTTCATCAATGGAGGAATATTGCTCGGATACATTTCGAACTATGCATTTTCAAAGATGAAACTTCAATTGGGCTGGAGAATGATGCTTGGAGTCGGCGCAGTCCCTTCGGTTCTCCTAGCAGTGGGAGTGTTCGCCATGCCGGAGTCACCAAGGTGGCTAGTCATGAGGGGCCGCCTCGGCGACGCAACCAAAGTCCTCAACAAAACCTCCGACACAAAGGAAGAGGCTCAGGAGAGGCTAGCCGACATCAAAAGAGCCGCAGGAATCCCCGAACACTGCAACGACGATGTCGTTCAAGTGTCAAAGCAAAACACCGGCGAGGGTGTATGGAAAGAGCTCGTCCTTTATCCTACGCCCGCAATCCGTCACATTGTAATTGCTGCACTCGGCATACACTTCTTCCAACAAGCTTCCGGCATAGACGCCGTCGTTTTGTACAGTCCCAAGATCTTTTTGAAGGCTGGGATTAAAAGCGACACGGATAGGCTTCTTGCAACCGTGGCCGTTGGATTCGTGAAGACGATGTTCATCTTGGTGGCCACCTTTATGTTGGACCGTGTCGGGAGGCGTCCGCTGTTATTGTCTAGTGTTGGTGGCATGGTGCTCTCGCTTCTCACGCTCGCTGCCAGCCTCACGATCATTGATCACGCGGAGCACAAGCTGATGTGGGCCGTTGGATTGAGCATAGCAACCGTTTTGTCCTACGTGGCGACTTTCTCGATTGGTGCGGGGCCCATCACGTGGGTCTACAGCTCCGAGATTTTCCCGTTGAGGTTGCGGGCACAGGGTGCGGCCATGGGGGTTGTGGTGAACAGGGTCACCAGTGGGGTCATCTCAATGACCTTTCTGTCCCTAGCCAAAGCCATCACAATTGGTGGGGCATTCTTCCTTTTCGGAGGGATTGCCACGGTTGCGTGGGTATTCTTTTACACCATGCTCCCTGAGACGCGGGGTAAGACACTTGAAGAAATGGAAGGGTCTTTTGGTAAATTTAGTGCCAAGTCCAGTACAAGTGGCAAGGGAGTTGACCATAGCAATGGCCATGTCCAGTTAGGAACCAATGTCCGAACTTAG 1566 0.5192 MTEGKAVEAGSQNKGLADFDPQKKPKRNKFAFACAILASMTSILLGYDIGVMSGAAIYIQRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGAIFFAGAILMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFFTSFPEVFINGGILLGYISNYAFSKMKLQLGWRMMLGVGAVPSVLLAVGVFAMPESPRWLVMRGRLGDATKVLNKTSDTKEEAQERLADIKRAAGIPEHCNDDVVQVSKQNTGEGVWKELVLYPTPAIRHIVIAALGIHFFQQASGIDAVVLYSPKIFLKAGIKSDTDRLLATVAVGFVKTMFILVATFMLDRVGRRPLLLSSVGGMVLSLLTLAASLTIIDHAEHKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLAKAITIGGAFFLFGGIATVAWVFFYTMLPETRGKTLEEMEGSFGKFSAKSSTSGKGVDHSNGHVQLGTNVRT* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3125 521 PRINTS Sugar transporter signature 42 52 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3125 521 PRINTS Sugar transporter signature 393 414 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3125 521 PRINTS Sugar transporter signature 125 144 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3125 521 PRINTS Sugar transporter signature 299 309 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3125 521 PRINTS Sugar transporter signature 416 428 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3125 521 Coils Coil 230 250 - -
Dod03g3125 521 PANTHER SUGAR TRANSPORTER 14 514 - -
Dod03g3125 521 SUPERFAMILY MFS general substrate transporter 20 489 IPR036259 -
Dod03g3125 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 481 IPR020846 GO:0022857
Dod03g3125 521 MobiDBLite consensus disorder prediction 499 521 - -
Dod03g3125 521 CDD MFS_PLT 37 488 IPR044776 GO:0005351
Dod03g3125 521 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3125 521 ProSitePatterns Sugar transport proteins signature 2. 130 155 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g3125 521 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 514 IPR045262 GO:0015144
Dod03g3125 521 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g3125 521 Gene3D MFS general substrate transporter like domains 24 495 IPR036259 -
Dod03g3125 521 Pfam Sugar (and other) transporter 34 490 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g3125 521 ProSitePatterns Sugar transport proteins signature 1. 88 105 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3125 Dod-Chr3 63846630 63850280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3125 21 518 Organic Solute Cotransporters AT3G18830 74.553 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3125 - - gmx:100800461 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3125 03 63846630 63850280 Dod03g3125 03 63846630 63850280 ECH
Dod03g3125 03 63846630 63850280 Dod02g0590 02 7625048 7628544 ECH
Dod03g3125 03 63846630 63850280 Dod10g1854 10 39975867 39979919 PCT