Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3069 ATGTATCCGAGGATCATTAGAGATTGGACACAAACCCTTCAATCTTTTCTGGGGTTGATGGGTATTATTACCCTACTACAGCAGCACTATGGACGACGACATGTGCAAGAAGACAACAAAGAGAACAATAATAGTATTGCCATTCAAGACGAGCAACAGCAACAAGTGATGACAGAGGCGGCAACATCAACAGCATCAGCAAGTGAGATATGCGTAGAAGAGCCTCTTTCTCTGGAGAACAATGATATTGCCATTCAAGACCAGCAACAGCAAGTGATGACAAAGACATGCGAGATATGCACAGAGCCTCTTTCTCCAGAGGACTTCTTCAACTACAGCAACGACGACTACCAGTGCAAGCACCCGTTTTGCACTGAATGCATATCCAAATACATCAGAGCCCAGATAGAAGGGAATAAGAATGGGATGATACGGTGCCCAGCATGGAAGTGCAAGCAAATGTTGGACCCCATGTTGTGCAGGTCCATCATCCCGAAACAACTCTTCCATCAATGGTGCGATGCACTTTGCTTTTCAGCACTCCTTGAGGTCCAAGGCAGATGTTACTGCCCCTATGAGGGTTGCAAAGAATTGATAATCAACGAATGTGGAGGTGGTGAGTCTGTGAGGAAAGTGAAGTGCCCCAAGTGCAAGAAGTTCTTGTGCTTCAAGTGCCAGGTTCCTTGGCATGAAGGGAATAATAGTACGTGCGAGAGCCACAGGGATGCTTTGTTTCTACAACTCGCGAGAAGGCAACGATGGCAAACATGTCCTACTTGTGGTCAATGGGTTGAGCGTGTTTCAGGATGTGAAAGCGTTCACTGCAGGTAA 831 0.4645 MYPRIIRDWTQTLQSFLGLMGIITLLQQHYGRRHVQEDNKENNNSIAIQDEQQQQVMTEAATSTASASEICVEEPLSLENNDIAIQDQQQQVMTKTCEICTEPLSPEDFFNYSNDDYQCKHPFCTECISKYIRAQIEGNKNGMIRCPAWKCKQMLDPMLCRSIIPKQLFHQWCDALCFSALLEVQGRCYCPYEGCKELIINECGGGESVRKVKCPKCKKFLCFKCQVPWHEGNNSTCESHRDALFLQLARRQRWQTCPTCGQWVERVSGCESVHCR* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3069 276 ProSitePatterns Zinc finger RING-type signature. 119 128 IPR017907 -
Dod03g3069 276 SMART ibrneu5 171 237 IPR002867 -
Dod03g3069 276 ProSiteProfiles Zinc finger RING-type profile. 97 150 IPR001841 -
Dod03g3069 276 Pfam IBR domain, a half RING-finger domain 186 233 IPR002867 -
Dod03g3069 276 ProSiteProfiles TRIAD supradomain profile. 93 276 IPR044066 -
Dod03g3069 276 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 87 275 IPR031127 GO:0004842|GO:0016567
Dod03g3069 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 181 IPR013083 -
Dod03g3069 276 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 87 275 - -
Dod03g3069 276 SUPERFAMILY RING/U-box 95 177 - -
Dod03g3069 276 Pfam Zinc finger, C3HC4 type (RING finger) 97 147 IPR018957 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3069 61 276 C3H Transcription Factor Family AT2G19610 25.833 2.36e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3069 K11975 - han:110915782 177.178