Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3053 ATGGTACTTCGATCTGATCTCTCCGTCTTCATAGATTCTTGTAGTCTAAATTATGCTTGTTGGTTTTCATCTGCTACGGATTACCTCAACCCAGAAGGTGGAAATGAATCAGTGGTGAATAACCCCAAGCAAATTCATGAGATTAAGGACTTCCTCCTCACAGCCCGGAGGAAGGATGCACGCTCTGTGAAAATCAAGCGTAGCAGAGATGTGGTCAAGTTCAAGGTTCGTTGCTCCAAGTACCTGTACACCCTTTGTGTCTTTGACCCTGAGAAGGCTGATAAGTTGAAGCAGTCACTTCCTCCAGCGGCGTATTGA 318 0.456 MVLRSDLSVFIDSCSLNYACWFSSATDYLNPEGGNESVVNNPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPAAY* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3053 105 Gene3D - 41 105 IPR038464 -
Dod03g3053 105 Pfam Ribosomal L38e protein family 42 103 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dod03g3053 105 PANTHER 60S RIBOSOMAL PROTEIN L38 42 103 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dod03g3053 105 PANTHER 60S RIBOSOMAL PROTEIN L38 42 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3053 Dod-Chr3 63278570 63281912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3053 42 103 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.935 1.83e-37 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3053 K02923 - gmx:100805669 125.946