Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3016 ATGCAATTTTGCATGTGTCTGTTTGTGAAGCCATCCACATTACTCTATGCACACGACGGTGATGATGTTCCAGGAATCATCAAAATAATCAGATATAATAACATAATAACATACCAACTTGTCTCCATGCTCTCTACACTTTCATGCTTGAGTTGGACCCTTGTTTATATATTAGCAGCAGTGAGCTCAGCAGCTTCTTCCAAATCAGTGTTGTGTGGAAGTGGTTCCTCAGATTGCAAATTCCAAGTTCAAGACAAGATGGATCTAAAAATACCAATAGAGGACCAGTTCTCCAAGCTGCATCCTTCCTTCCCAGAAAACACCAGAATTGGAATAGTTGGTGCAGGTCCAAGTGGCTTATCAGCTGCTTATGCACTTGCCAGGCTTGGTTATAAGAATGTCACGGTCTTGGAGAAGCACCACACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTTGGTGGACAAGTTCTTGCTGCAAGCAGTGCTCCAATCATCTTTCAATTGGCAAAAGAGACAGGTTCTGCACTGGAAGAAATGGACTCTCACAAGCTTGCTCTTATTAACCCTTCCTCTGGAGAATACCAAGATATTAATGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATTCAGGAAAAGGTGAAGAATTCTGGTCTTATTGGGGTCCATGCTGTTAGTGGCATTGCTTCAGACTTGGCTCCAGAATATCTCGAGTGTCATGGACTCAAATCTGTTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGGTTTGTTCAAGATATGCCGTACGCTTACCTTCATGAATTTACTAGAACCTCCATGGCTGGAAAAATTAGGCGCTTTAAAGATGGATATACAAGTCTTTGGCAGAAGATTGCTGAATCTCTTCCTTTAAAACTTTGTTGTAACACTGAAGTATTGGCAATCAGGAGGAGCTTTGATGGTGTCACCGTTAATGTCAAGAGCTTAAATGGAGTTGAAACTTTGGAATTTGATAAGATCATAATCTCTGGTTCATTTCCTTTGAAATATGGAAGAACTTATAGATCATTGACTTCAACTTGCATAGATTGTGAACCTGAAGTAATGGATACAAGTGACCTTGAAAAGGATTTGTTCAGCAAAGTAGAAACAAATGACTACTACACCACTGTCCTAAAGATTAATGGGCTAGAACACTTGCCAGTTGGATTTTATTATTTTGGTGAATATATGGAAGATCCTAGCACAGTCGGACATCCAGTTGCAATTCAAAAATTTTATGCTGACACTAATTTATTCTTGCTATGGTCTTATGGAAACTCTGTTGACATTAAGGGACCAACTGTCACTGATCTTGCAATCAACACAGTAGAAGCCATGGGGGGAAAGGTTGAGAAAGTCATTCTTCAACGCCGTTTTAAGTATTTTCCTCATATCGGTAGCCAAGATATGAAAGATGGATTTTATGAAAAGTTGGAATCAGTGCTCCAGGGTTCAAGGAATACTTATTATGTAGGTGGGCTATTGGCCTTTGAACTTACAGAGAGAAATTCTTCTTATGCCATGGCTTTAATCTGCAAGAACTTTGCAAATAGCAATGACATGCCAAAATTTCCTTACACCAAGAGTTTGTTTCCCTTGCAAACTGAGTACCAGAAAAAGGATCCTAAAAAGATAGGTGAATTGCCAGGAGTGCAGTTTCCTAATTTGCCTATTTTGAATAGCTATTTAAAGTACTGGGGAACTCATCCAATCACTCAAAATAGAACACTTTATACCTGGATAAATGAAGAAGGCACACCAGTTTGCCAGAGAACTTATGGAGAACAAGATTTTAATGCTTCTTGCATTGCTCAGAAGCTCTTAACAAACCAAAAGCCAGTTATCAAGCCAGGTGACAAGGTTCTTCTGGTTTATGTGCCTGGTCTGGATTTCATTGATTCCTTCTTTGGATGCTTGAGTGCAAGAGTCATACCGGTCCCCGTCCTACCACCAGATCCAATGCAAAGAAGTGGACAAGCACTGATGAAAATTGAAAATATTGCCAAGTCATGTGGCATAGTGGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGTGCTGGTTCATTGAAAAATTTAATCTCATTATCCGGAAAAAATGGGAAGTCCTCAGCTCGGTGGCCGAATCTCCCATGGCTACATACTGATAGTTGGATCAAGAACTCCAAAAGTCTGATTTTGAAACATCTAGATGATCGTAGTGAAGCTCAACCTGGTGATATATGTTTCTTACAATTTACCTCAGGCTCAACCGGTGATGCTAAAGGAGTCATGATCACTCATGGTGGGCTTATTCACAATGTCAAGTTGATGCGAGGCCGATACAAGAGCACTTCAAGGACAATCCTTGTAAGTTGGCTTCCTCAATATCATGACATGGGGCTAATTGGGGGGCTTTTTACATCTCTTGTTAGTGGTGGAACTGCAGTTTTGTTTTCACCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATGAGCAAGTATCAAGCAACTCATAGTGCTGGCCCTAACTTTGCCTTTGAGTTGGTGATTCGAAGGTTAGAGTCTGACAAGGATAAGCTTCAGAATTTAGTCCTTTCATCCATGATTTTTCTTATGGCTGCTGCTGAACCAGTGAGACAAAAGACTTTGAAAAGATTTATTGAGCTAACCAGTCCTTTTGGATTATCTGAAAAGGTGATGGCTCCTGGATACGGCTTAGCAGAAAATTGTGTCTTTGTCAGTTGTGCATTTGGAGAAGGCAAGCCTATTACTGTTGATTGGCAGGGAAGAGTTTGTTGTGGATATATTCACCAAGAGAATGCAGATATGGACATCAGAATAGTTGATCCAGAGACTTGTGAAGAGCTTCAGGAAGATGGAAAGGAGGGAGAAATTTGGATTAGTAGTCCAAGTGCAGGAGTAGGATACTGGGGAAGGGAAGAATTGAGTCAAAAAACTTTTAGGAATGAACTTCAGAATCATCGTGGACGTTACTACACAAGAACAGGAGACTTAGGAAGAATAATTGATGGTAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGGAATATTTACTCAGCAGATGTTGAAAAGACAGTTGAGACTTCATCTAAATTACTTCGTCCCGGTTGTTGTGCCGTCATTGGTGTCCCTGAGGAAGTATTATCATCAAAAGGGATTTCCATTCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAAGTAAGGGATGGAAAACCAATTGGAAAAGATGTGATTGAGAAAATTCAGACTTGCGTAGTGGAAGAACATGGAGTTAGTATTGCTTGTGTCAAGTTGGTCAAGCCTAGAACCATTAGCAAAACAACATCTGGAAAAATCAAGAGATTTGAATGCATCAAGCAGTTCACAGATGAAACACTGAACTTGGTACCACAAGGTCCACAATCTATCCTGTCGAAGAAATATATGGTAAGGTCATATACTACAAGAACATACAGGGAAGGAAAAACATCCAGGCCCCAACACATACCTGCACCTAGTAAAAGGATCAGTAAGAATGACATTGTGGAATTCTTAAAGGGACTTATTTCTGAGCAGACTGGTATCCCAATCAACAACATATCAGTCACAAACAACCTCACATCCTATGGAATTGACTCAATTGGCGTGGTTAAAGCAACTCAAAAGCTCTCAGATTTCCTGGGAACACCAGTTGCTGCTATAGATGTTTTCACTGCATCTTGCATTCAAGAATTGGCTAATTTCTCAGAGGATCTGCTATCTAAGTCTCAGCCTCATCTTCCTAGTAGTCCATCCAATGTTCCAGAAGCTGAGATGGATTCTACTGAATTGGTTGTAGAGGTATCTAAGTCTCACCAATTGGGTATCCATTTACTTCAAGTCCTAGCACTTGTTTATATTTCTATCATGCTGGCCTCCCCTGCTTATCTATCCATCAATGCTTTCCTAAGTTTTATTCGAAATATCAGCATATTAGTAGATGAAATTCCCTGGTCAGGTTATTTGATTTCCCTTACTTTTGCACCCCTTTCTTGGATTCTTTGCATTGCTGCTACTTGCATTTGCATTTCATTATTTGGAAATTCTTTCTTAAGGCCAAACTATGCCATTGCCTCTGAAATCTCCATATATTCAGTGGATTTTGTGAAGTGGTGGGCATTATATAAGGTCGAAGAAATTTCTTCCAAAGTTCTGGCAATTCACCTTAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTCAGTTTTGCTTGATACAGTTGACATCACTGACCCAAACTTGGTATCAATTGGAGATGAAGCTGTCATTGCAGAAGGTGTTTTGGTTCAAAGTCATGAGGTAAAGAGTGGAATTCTAAGTTTCCACCCTATCAGGATTGGCAAATGTTCCTTAATTGGACCTTATGCTGTTTTACAAAAAGGAAGTGTTATTGGAGAAGATGCTGAGGTACAGGCCTTGCAAAAGGTTGAAAGAGGCCAACATGTGCCAAGAGCTGCTAAGCTTAATAATGTTGGTAAGAATGCAGAGTTGCCTGGAAAAAATCAATCTGATATTGTCTACCAATTTATTGGGATCTATCTCGTTGGCTTTCTTAGTTCCCTGGCTGCAGCTATTGCCTACTTCATATATATCTGGTTCTCCCAGCAAAATCCATCATTCCTACACTTCTCATTTGTTTGCATATGTGGGGCCTTCCACTGGATCCCCTTTACTATTGTTGCATATGCTACCATGTTTTCCAATGTCTCATCAAATCCCATCACCTTTGCCATTTCATTTGCCAGTGCCTACTTGCTTCATGGTATCATACTCATCACTCTCACCAGTGCTTTCGCTGGTTTCCTCATCACATCCAATAAAAAACAAACCCAATATAAAACTTGGCTTAGACACCAAATGATCATGTCCTGCCACCTTAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATTTTTACACCTCTTGGGTGCAAAAATTGGTAAGCATTGTTCCATCAGAGCCATCAACCCGGTTTCAAACCCGGAATTAATGTCAATTGGTGATGGTGTCCATCTTGGAGATTTTAGTAGGATAATTACTGGTTTTCACTCTTCCAATGGATATGCTTATGGGAAAATTGAGATTCAAGATAATTCAGTTGTTGGGAGCCAAAGCCTAATTCTCCCAGGTTCTATTCTCCAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATAAACTCTACACTTCAAGAGGGTGGTGTTTACATTGGATCACAATCCCAAGCTATTATTAGGAACTCAGTGGATGCTTCAGATGAAAGTAGAGAAGAGATGGACAATGAATGCAAGAAAAAAGCTTTGAATAAAAAGGACTCACAAAATGTGACCTTGGCCAGAACATGGTATCAAGCATTCTCAACACTCTTCATTCAGCCTTTGCTGCAAACATTTTTGCCTTATTTTGTGGTCGGTTTATCAATTTGTGCACCTTTGAACTTTGTTGTCAACCCAAAGATTGCCAAGAATCTCTCACTGCATTGGCTGCTTCCTTTGGTTTGGGTTCTCTCAGGTGCTCTAGCTGCATTGGCATGTATTATAGCCAAATGGGGTCTTGTGGGGAGCAAGAAAGCTGGTGAAACTGTGCCTATATGGAGCATAAGGATCACCATGGACAGCACATGGCAAGCAATGAGAACACTAGTTGGAGAGTATTTCATGGACATGACAAGTGGCTCATTCTTGCTTGTGTTGTGGATGAAGCTGATGGGTGCAGATGTAGACATGGATCATGCAGTTTATGTTGATAGCATGGGAGCCTTATTGAACCCAGAAATGGTTAAGATTGAGAGAGGAGGGTGTGTAGGAAAAGAAGCATTGCTCTTTGGACACATATATGAAGGTGAAGGAGGGATGGTGAAGTTTGGAGAGATCAAAATAGGAGAAGATGGGTTTGTTGGGAGTAGAGCAGTGGCCATGCCTGGTGTGCAGTTGGAGGATGAGGGCAATCTGGGTGCTCTTACTCTTGCCATGAAAGAAGAAATCATAAGGTCAAGGTGA 6159 0.4053 MQFCMCLFVKPSTLLYAHDGDDVPGIIKIIRYNNIITYQLVSMLSTLSCLSWTLVYILAAVSSAASSKSVLCGSGSSDCKFQVQDKMDLKIPIEDQFSKLHPSFPENTRIGIVGAGPSGLSAAYALARLGYKNVTVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPIIFQLAKETGSALEEMDSHKLALINPSSGEYQDINVADDYVSVMSLTLEIQEKVKNSGLIGVHAVSGIASDLAPEYLECHGLKSVPKSVAYGYTASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKDGYTSLWQKIAESLPLKLCCNTEVLAIRRSFDGVTVNVKSLNGVETLEFDKIIISGSFPLKYGRTYRSLTSTCIDCEPEVMDTSDLEKDLFSKVETNDYYTTVLKINGLEHLPVGFYYFGEYMEDPSTVGHPVAIQKFYADTNLFLLWSYGNSVDIKGPTVTDLAINTVEAMGGKVEKVILQRRFKYFPHIGSQDMKDGFYEKLESVLQGSRNTYYVGGLLAFELTERNSSYAMALICKNFANSNDMPKFPYTKSLFPLQTEYQKKDPKKIGELPGVQFPNLPILNSYLKYWGTHPITQNRTLYTWINEEGTPVCQRTYGEQDFNASCIAQKLLTNQKPVIKPGDKVLLVYVPGLDFIDSFFGCLSARVIPVPVLPPDPMQRSGQALMKIENIAKSCGIVAILSTVAYHSAVRAGSLKNLISLSGKNGKSSARWPNLPWLHTDSWIKNSKSLILKHLDDRSEAQPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMRGRYKSTSRTILVSWLPQYHDMGLIGGLFTSLVSGGTAVLFSPMTFIKKPLLWLETMSKYQATHSAGPNFAFELVIRRLESDKDKLQNLVLSSMIFLMAAAEPVRQKTLKRFIELTSPFGLSEKVMAPGYGLAENCVFVSCAFGEGKPITVDWQGRVCCGYIHQENADMDIRIVDPETCEELQEDGKEGEIWISSPSAGVGYWGREELSQKTFRNELQNHRGRYYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVETSSKLLRPGCCAVIGVPEEVLSSKGISIPDGSDQVGLVVIAEVRDGKPIGKDVIEKIQTCVVEEHGVSIACVKLVKPRTISKTTSGKIKRFECIKQFTDETLNLVPQGPQSILSKKYMVRSYTTRTYREGKTSRPQHIPAPSKRISKNDIVEFLKGLISEQTGIPINNISVTNNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCIQELANFSEDLLSKSQPHLPSSPSNVPEAEMDSTELVVEVSKSHQLGIHLLQVLALVYISIMLASPAYLSINAFLSFIRNISILVDEIPWSGYLISLTFAPLSWILCIAATCICISLFGNSFLRPNYAIASEISIYSVDFVKWWALYKVEEISSKVLAIHLRGTVFLKYWFEMLGARIGSSVLLDTVDITDPNLVSIGDEAVIAEGVLVQSHEVKSGILSFHPIRIGKCSLIGPYAVLQKGSVIGEDAEVQALQKVERGQHVPRAAKLNNVGKNAELPGKNQSDIVYQFIGIYLVGFLSSLAAAIAYFIYIWFSQQNPSFLHFSFVCICGAFHWIPFTIVAYATMFSNVSSNPITFAISFASAYLLHGIILITLTSAFAGFLITSNKKQTQYKTWLRHQMIMSCHLRFAKLLSGTEAFCIFLHLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFHSSNGYAYGKIEIQDNSVVGSQSLILPGSILQKNVILGALSVAPINSTLQEGGVYIGSQSQAIIRNSVDASDESREEMDNECKKKALNKKDSQNVTLARTWYQAFSTLFIQPLLQTFLPYFVVGLSICAPLNFVVNPKIAKNLSLHWLLPLVWVLSGALAALACIIAKWGLVGSKKAGETVPIWSIRITMDSTWQAMRTLVGEYFMDMTSGSFLLVLWMKLMGADVDMDHAVYVDSMGALLNPEMVKIERGGCVGKEALLFGHIYEGEGGMVKFGEIKIGEDGFVGSRAVAMPGVQLEDEGNLGALTLAMKEEIIRSR* 2053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3016 2052 Pfam Flavin containing amine oxidoreductase 118 353 IPR002937 GO:0016491
Dod03g3016 2052 Gene3D - 109 532 IPR036188 -
Dod03g3016 2052 PANTHER AMP-BINDING ENZYME 87 1818 - -
Dod03g3016 2052 PANTHER AMINE OXIDASE 87 1818 - -
Dod03g3016 2052 Gene3D - 1039 1166 IPR045851 -
Dod03g3016 2052 Gene3D - 1197 1279 IPR036736 -
Dod03g3016 2052 PANTHER AMINE OXIDASE 1820 2052 - -
Dod03g3016 2052 SUPERFAMILY Trimeric LpxA-like enzymes 1431 1533 IPR011004 -
Dod03g3016 2052 Gene3D - 570 1038 IPR042099 -
Dod03g3016 2052 PANTHER AMP-BINDING ENZYME 1820 2052 - -
Dod03g3016 2052 SMART Phosphopantetheine attachment site 1210 1281 IPR020806 GO:0031177
Dod03g3016 2052 SUPERFAMILY Trimeric LpxA-like enzymes 1690 1778 IPR011004 -
Dod03g3016 2052 ProSitePatterns Phosphopantetheine attachment site. 1236 1251 IPR006162 -
Dod03g3016 2052 Gene3D Hexapeptide repeat proteins 1443 1546 - -
Dod03g3016 2052 CDD FAAL 595 1158 IPR040097 GO:0008610
Dod03g3016 2052 SUPERFAMILY FAD/NAD(P)-binding domain 106 357 IPR036188 -
Dod03g3016 2052 ProSiteProfiles Carrier protein (CP) domain profile. 1207 1281 IPR009081 -
Dod03g3016 2052 Pfam AMP-binding enzyme 610 1044 IPR000873 -
Dod03g3016 2052 Gene3D - 389 482 - -
Dod03g3016 2052 PRINTS Adrenodoxin reductase family signature 109 131 - -
Dod03g3016 2052 PRINTS Adrenodoxin reductase family signature 133 146 - -
Dod03g3016 2052 SUPERFAMILY Trimeric LpxA-like enzymes 1955 2045 IPR011004 -
Dod03g3016 2052 Gene3D - 180 288 - -
Dod03g3016 2052 SUPERFAMILY Acetyl-CoA synthetase-like 593 1163 - -
Dod03g3016 2052 SUPERFAMILY ACP-like 1205 1294 IPR036736 -
Dod03g3016 2052 Pfam Phosphopantetheine attachment site 1212 1276 IPR009081 -
Dod03g3016 2052 ProSitePatterns Putative AMP-binding domain signature. 766 777 IPR020845 -
Dod03g3016 2052 Gene3D Hexapeptide repeat proteins 1686 1830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3016 Dod-Chr3 62515142 62523324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3016 731 1159 Monolignol Biosynthesis Gene Families AT1G20480 25.000 3.29e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3016 - - adu:107477067 3093.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3016 03 62515142 62523324 Dod03g3016 03 62515142 62523324 ECH
Dod10g1796 10 39160382 39168048 Dod03g3016 03 62515142 62523324 PCT