Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3014 ATGTCGACGACGGCGACCACCACGCACGGCGGCGGCGGCGACTCATTTCCCGACGACTTCGAGACGCTGACGCTGGACATGGAGTCCCCGGCATTACTCCACGCGATCTCGGACCACGGTGGCTATGCCTTCGTAAGCATGGCGGCGCTGGCGGCGGCCGGAGACTTCAGAGCGGCTGAGGCGGCGCATGAGATGGCGTGGGAGCAGCTGCACTCTGGACCGTGGAGCTCGGTGCTTCCGGTGTGGCGCGATGCGTATTCGATGGCGTGCATCCACGTGGCGAGGCACCACCATGGGAAGGGTGAGTTCAAGGAGGCGCTTAGGGTGTTGGATATGGGGATCATCATGGGAGGGACGCTGCTGAGGAAGGATTTGGACTCCGCGATCGAGAAGGTTTCAGAGAGAGCGAGGAGGAGGAGGGGCACCGCTAGGGTTTCTGAGGGGAACTCCTCCTCCGAGCAGAGGTTCGTGGATCGCGAATTTGATGTGGCTGAGGTGCTCCAACTTTTACCTGTGAAGTCCCTTTCCTCTAAGGTCGTGGCAAAGAGGTCCGGGTTGTCGCTGGAGGAGTTCTTGAAAGATCATTACCTGGCCGGTGCCCCAGTTATTATCAGTGATTGTATGGCTCATTGGCCGGCCAAGATGAAATGGAATAGCATAGATTACTTGCTGGGAGTTGCTGGTGACCGCACAGTTCCAGTTGAGGTTGGCAAGAACTATCTATGTACGGAGTGGAAGCAAGAGCTAATTACATTTTCAGAGTTTCTTCAGCGTATAAAATCCAATGACTGCTCTCCTGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAAATAAATGAGCTTCGGAAAGATATCTTTATTCCTGACTATTGTTTTGCTGGTGGAGGGGAGCTAAGATCTCTTAATGCTTGGTTTGGTCCTGCTGGAACAGTAACACCATTACACCATGATCCACATCACAACATACTAGCTCAGGTTGTTGGGAAGAAATATGTAAGGCTTTACTCAGCATCTTTGTCTGAGGAGCTTTTCCCCTACTCTGAGACCATGCTTAGCAATTCCAGCCAGGTTGATTTAGATGACATAGATGAAAGGAAGTTTCCCAAGGTGCAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGACATGTTATATATCCCGCCAAAATGGTGGCACTACGTGCGGTCTCTAACTACCAGTTTCTCGGTTAGCTTTTGGTGGAGCGAGGGTGAATCTTCAAATGCATCCTAA 1266 0.515 MSTTATTTHGGGGDSFPDDFETLTLDMESPALLHAISDHGGYAFVSMAALAAAGDFRAAEAAHEMAWEQLHSGPWSSVLPVWRDAYSMACIHVARHHHGKGEFKEALRVLDMGIIMGGTLLRKDLDSAIEKVSERARRRRGTARVSEGNSSSEQRFVDREFDVAEVLQLLPVKSLSSKVVAKRSGLSLEEFLKDHYLAGAPVIISDCMAHWPAKMKWNSIDYLLGVAGDRTVPVEVGKNYLCTEWKQELITFSEFLQRIKSNDCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYSASLSEELFPYSETMLSNSSQVDLDDIDERKFPKVQDLEFVDCILEEGDMLYIPPKWWHYVRSLTTSFSVSFWWSEGESSNAS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3014 421 PANTHER - 41 415 - -
Dod03g3014 421 Pfam Cupin-like domain 190 414 IPR041667 -
Dod03g3014 421 SUPERFAMILY Clavaminate synthase-like 183 413 - -
Dod03g3014 421 Gene3D Cupin 179 413 - -
Dod03g3014 421 SMART cupin_9 270 420 IPR003347 -
Dod03g3014 421 ProSiteProfiles JmjC domain profile. 279 421 IPR003347 -
Dod03g3014 421 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 41 415 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3014 174 412 Acyl Lipid Metabolism Gene Families AT3G45880 23.649 9.89e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dod03g3014 Cupin_8 4.8e-48 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3014 K24444 - gmx:100813075 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3014 03 62494502 62499008 Dod03g3014 03 62494502 62499008 ECH