Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3006 ATGTCCACCAGCATGGATTCACCACCTGAGCTCAACCTCGACAACCTCAAAGCTCTCAAAGTCCTCGGCAAAGGCGCCATGGGCACCGTCTTCCTCGTCCACGACACCACCACCACCACAAACACCGCCACCTTTGCCCTCAAAGTGGTCGACAAAACCACCCTCCACGGCAAGCGGGACGCCGAGCGCCGCGCCAAATGGGAAATGCAGGTCCTCTCCCAGCTCTCCTCCGGCCACCCTTTCCTCCCTTCCCTCCTCGGCTCCCTCGACACCCCCGATTTCCTCGCATGGGCCCTCCCTTACTGCCCCGGCGGCGACCTCAACCTCCTCCGCTACCGCCAAAACGACCGCGTTTTCTCCCCCTCCGTCATCCGCTTCTACCTCGCCGAGATCCTCTGCGCCCTCCACCACCTCCACTCCCTTGGCATCGCCTACCGCGACCTCAAGCCCGAGAACGTCCTCATCCAAAACACCGGTCACGTGACCCTCACGGACTTCGACCTCTCCCGCAAACTCACGCCCAAAACCGTTGCAACCGCCAAAACCGTTATCACTAACATTTCCCCCTCCGCTCCCCTTCCGGTTCCGAAGAATAGGATTCTTCCAGAACCTTCTCGAAGGAGGCACCACCGAAGGAACTTCACGCGGTGGTTCCCGCTCCTCCCGTCGGATTCCGCTCACAAGGGGAATAATAAGACCGCGCTGAAGAAGGCGAAGTCCGCTCGAGTCAGCCCGGTGAGTCGGAGGAGGACGAGTTTCACGAGCGGGGAGCGGTCGAACTCGTTCGTCGGGACGGAGGAGTACGTGTCGCCGGAGGTGGTGCGCGGCGAGGGTCACGATTTCGCTGTGGATTGGTGGGCGCTTGGGATCCTCGCTTTCGAGATGATGTACGGTACGACGCCGTTTAAAGGGAGGAACCGGAAGGAGACGTTCCGGAACGTGATCGGGAAACCGCCGGAGTTCGTCGGAAAACGGTCGGCGCTTACGGACCTCATCGAGAGGCTGCTGGAGAAGGATCCAACGAAGCGGTTGGGTTACACGCACGGTGCTGAGGAGATCAAGGAGCACGAGTTTTTCCGAGGGTTGCGGTGGGACATCTTGACGGAGGTGGTGCGGCCGCCGTTTATTCCGGCGAGGGACGACGGCGGTGGAGATTTAACTGAGGATTTGGCAGCCGGGGGAGTGGACATTAGGGACTATTTTCAGAGGTTGAAATCGCTGCCGTCGTTGCCGCCTTCGCCATCGCCGTCGCCGTCGCCGTCTGGGAAGTTCAAGAGGAATGTTTCTCTGGCGGAATTCTGA 1302 0.6045 MSTSMDSPPELNLDNLKALKVLGKGAMGTVFLVHDTTTTTNTATFALKVVDKTTLHGKRDAERRAKWEMQVLSQLSSGHPFLPSLLGSLDTPDFLAWALPYCPGGDLNLLRYRQNDRVFSPSVIRFYLAEILCALHHLHSLGIAYRDLKPENVLIQNTGHVTLTDFDLSRKLTPKTVATAKTVITNISPSAPLPVPKNRILPEPSRRRHHRRNFTRWFPLLPSDSAHKGNNKTALKKAKSARVSPVSRRRTSFTSGERSNSFVGTEEYVSPEVVRGEGHDFAVDWWALGILAFEMMYGTTPFKGRNRKETFRNVIGKPPEFVGKRSALTDLIERLLEKDPTKRLGYTHGAEEIKEHEFFRGLRWDILTEVVRPPFIPARDDGGGDLTEDLAAGGVDIRDYFQRLKSLPSLPPSPSPSPSPSGKFKRNVSLAEF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3006 433 Gene3D Phosphorylase Kinase; domain 1 14 101 - -
Dod03g3006 433 MobiDBLite consensus disorder prediction 406 433 - -
Dod03g3006 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Dod03g3006 433 SMART serkin_6 16 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3006 433 PANTHER FLIPPASE KINASE 1-RELATED 11 409 - -
Dod03g3006 433 Pfam Protein kinase domain 18 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3006 433 Pfam Protein kinase domain 254 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3006 433 ProSitePatterns Protein kinases ATP-binding region signature. 22 48 IPR017441 GO:0005524
Dod03g3006 433 Gene3D Transferase(Phosphotransferase) domain 1 256 378 - -
Dod03g3006 433 ProSiteProfiles Protein kinase domain profile. 16 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3006 433 MobiDBLite consensus disorder prediction 225 258 - -
Dod03g3006 433 SUPERFAMILY Protein kinase-like (PK-like) 13 392 IPR011009 -
Dod03g3006 433 Gene3D Transferase(Phosphotransferase) domain 1 102 177 - -
Dod03g3006 433 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3006 Dod-Chr3 62368104 62369723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3006 11 433 AGC Kinase Gene Family AT3G20830 57.611 1.43e-162 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod03g3006 Pkinase 7.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3006 - K08286 adu:107476791 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3006 03 62368104 62369723 Dod03g3006 03 62368104 62369723 ECH
Dod10g1784 10 38981810 38983402 Dod03g3006 03 62368104 62369723 PCT