Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2999 ATGAAGTTTTGGTCTACAGATGAAAACATGGAAGCTAGTAGGATCAATGATCTTAAGAAACCTTTGTTGCATACTCCACAAGAAGATGTCGCAGTTGGTACTATTATATTTCAAATATACGATATCAAGTGCGCATCATCTGTAAATTTTGTTGAATCTAAACTTAGAAACCTTCAAGGGATAGATTGCATCATGGTGTCGCCACTTAATGGCCGAGCTGCAATCAAATATACCCCAAAGCTCATTACTGCAAACAAAATAAAAGAAACCATAGAAGACACTGGTTTTAGAGTTGATGTGCTCCAGGAGCAAGACATATCAGAATGCCGAGTCAGGATTAAAGGAATGACATGTGTAAGCTGCTCCCAGTCTGTTGAGAATGCTCTTCAAATGGTTGATGGAGTGAAAAAGGCAATAGTAGGTCTAGCTTTAGAGGAAGCAAAAGTGCACTTTGATCCTAACCTTGTTGATACCAACATGATAATTAAGGCTATAGAAGATGCTGGCTTTGGAGCAGATCTCAATAGCTTCCAGAATGATTTGAACAAAGTGCCTCTGAAACTTGAAGGGGTTGATTCTCCAGAAGATGTGAATGCCATAATTTCTTCTCTTGAGTTAACTGTAGGTGTGAATAATTTTGAAATGGATCTGACAGAGCATATAGTTACGGTCAGCTATGATCCAGACATTACAGGTCCAAGATCTCTAATACACTGCATTCAGGCTGCTAGCCTTGGCCCCAATAGATATCGAGCAACCTTGTACACTCCTTCAGGAAAAAGAGAAATGGAGAAGGGTAATGAAATTCGTATGCATAGAGACCGAGTTTTGCTCAGCTGCATTTTTTCTGTTCCTGTTTTCATATTTTCCATGGTTCTTCCCATGCTTCCTCCCTATGGCAACTGGTTAAACTATAAGATCCACAATATGCTCACTCTTGGGTTGTTTATAAAATGGATACTTAGCACACCTGTGCAGTTCATAGTTGGCAGAAGGTTCTACGTGGGATCATATTATACATTAAGGCGAAGGTCTGCTAACATGGATGTGCTGGTTGCACTTGGGACTAATGCTGCTTATTTTTACTCGCTATATATTGTAATAAAGGCACTGACTTCAGATTCATTTCAAGGACAAGATTTCTTTGAGACCAGTTCTATGCTGATATCGTTTATTCTATTAGGGAAATATTTGGAAATTTTGGCTAAAGGGAAAACATCAGATGCTTTAGAAAAGCTGATACAACTTGTTCCTGATAAAGCTTATTTGTTAGATATCGATGCTGATGGAAATATCGTCACAGAGACAGAAATTGACACTGAACTCATACAAAAGAATGACATAATTAAGATTGTTCCTGGTGCCAAAATTCCCGTTGACGGTATTGTAATTAAAGGGAAAAGCTATGCAAATGAAAGTATGATCACTGGTGAGGCAAGACCTGTTAATAAAATTCCCGGAGACAAGGTTATTTGTGGGACTATCAATGAGAATGGTTGCTTGACTGTTAAGGCCACGCATGTTGGATCAGAGACTGCACTTTCTCAAATTGTTCAGCTCGTAGAAGCTGCTCAACTTGCCAGAGCACCAGTTCAAAAACTTGCTGACCATATTTCAAGGGTTTTTGTTCCAACAGTGGTTGTTGCAGCATTCATAACTTGGCTAGGATGGTTTATTCCTGGAGAAGCAGGTTTTTACCCTAGACACTGGATACCAGAAGCTATGGATGCTTTTGAACTTGCTTTGCAGTTTGCAATTTCTGTGCTAGTTGTTGCTTGCCCATGTGCTCTCGGTCTAGCAACACCAACAGCTGTCATGGTTGCCTCAGGTATGGGTGCTTCTCTTGGTGTGCTCATCAAGGGCGGTGATGCACTGGAAAAGGCACACAAGGTAAAAATTGTTGTCTTTGATAAGACCGGGACATTGACAGTTGGGAAGCCAGTGGTCGTTAGCGCAGTGCTGTTTTCTAAATTTTCTATGGAGGAGTTATGTGACATGGCCATTGCTGTGGAGGCCAATAGCGAACATCCGATAGCAAGAGCTGTTGTGGTACATGCTAAGAGGCTGCGCGAGGGGTTTGGATCATGCACCGAGCAACTCCCAGAAGTGAAAGACTTTGAGGTACACGTCGGGGCTGGGGTTAGAGGAAAGGTTGGTGAGAAAACAGTATTAGTTGGGAACAAGAGACTTATGCATGCTAATAATGTCCCAATATGTTCTGAGGCCGAGAAGTACGTCTCTGAGAATGAAGCTCTGGCAAGAACTTGTGTATTGGTTTCAATTGATGGAAAGATTGCTGGAGCATTCTCAGTAACTGATCCTGTAAAGCCAGAGGCTAAGCGTGTCGTATCTTTTCTTCACTCCATGGGCATCTCGAGCATCATGGTGACTGGTGATAACTGGTCCACTGCAACTGCTATTGCAAATGAAGTCGGTATTGATAAGGTCTTTGCTGAGACGGATCCTCAGGGAAAGGCTGAGAAGGTGAAAGAATTGCAGATGAAAGGAATGACTGTGGCAATGGTGGGTGATGGAATAAATGATTCGCCAGCCTTAGCTGCTGCTGATGTTGGCATGGCAATTGGTGCTGGAACTGACATAGCTATAGAAGCAGCTGATATAGTTCTTGTGAAAAGCAGCTTGGAAGATGTGGTTACAGCCATAGATCTGTCTAGAAAGACCATGTCTCGTATCTGGCTCAACTACATATGGGCCCTTGGTTACAACATTCTAGGCATGCCAATTGCTGCTGGAGTCTTGTACCCTTTTATTGGAATCAGGTTGCCTCCATGGCTTGCTGGTTCTTGCATGGCTGCCTCATCACTTAGTGTGGTTTCTTCATCCCTCATGTTGCAGTTCTACAAAAAACCCTTGCATGTGGCTTCCACTTGA 2892 0.4225 MKFWSTDENMEASRINDLKKPLLHTPQEDVAVGTIIFQIYDIKCASSVNFVESKLRNLQGIDCIMVSPLNGRAAIKYTPKLITANKIKETIEDTGFRVDVLQEQDISECRVRIKGMTCVSCSQSVENALQMVDGVKKAIVGLALEEAKVHFDPNLVDTNMIIKAIEDAGFGADLNSFQNDLNKVPLKLEGVDSPEDVNAIISSLELTVGVNNFEMDLTEHIVTVSYDPDITGPRSLIHCIQAASLGPNRYRATLYTPSGKREMEKGNEIRMHRDRVLLSCIFSVPVFIFSMVLPMLPPYGNWLNYKIHNMLTLGLFIKWILSTPVQFIVGRRFYVGSYYTLRRRSANMDVLVALGTNAAYFYSLYIVIKALTSDSFQGQDFFETSSMLISFILLGKYLEILAKGKTSDALEKLIQLVPDKAYLLDIDADGNIVTETEIDTELIQKNDIIKIVPGAKIPVDGIVIKGKSYANESMITGEARPVNKIPGDKVICGTINENGCLTVKATHVGSETALSQIVQLVEAAQLARAPVQKLADHISRVFVPTVVVAAFITWLGWFIPGEAGFYPRHWIPEAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASLGVLIKGGDALEKAHKVKIVVFDKTGTLTVGKPVVVSAVLFSKFSMEELCDMAIAVEANSEHPIARAVVVHAKRLREGFGSCTEQLPEVKDFEVHVGAGVRGKVGEKTVLVGNKRLMHANNVPICSEAEKYVSENEALARTCVLVSIDGKIAGAFSVTDPVKPEAKRVVSFLHSMGISSIMVTGDNWSTATAIANEVGIDKVFAETDPQGKAEKVKELQMKGMTVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADIVLVKSSLEDVVTAIDLSRKTMSRIWLNYIWALGYNILGMPIAAGVLYPFIGIRLPPWLAGSCMAASSLSVVSSSLMLQFYKKPLHVAST* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2999 963 CDD HMA 111 172 IPR006121 GO:0046872
Dod03g2999 963 Pfam haloacid dehalogenase-like hydrolase 631 856 - -
Dod03g2999 963 Gene3D - 403 525 - -
Dod03g2999 963 Gene3D - 103 181 - -
Dod03g2999 963 ProSiteProfiles Heavy-metal-associated domain profile. 34 100 IPR006121 GO:0046872
Dod03g2999 963 Gene3D - 642 719 IPR023299 GO:0000166
Dod03g2999 963 Gene3D - 720 773 IPR023299 GO:0000166
Dod03g2999 963 CDD P-type_ATPase_Cu-like 275 937 - -
Dod03g2999 963 Pfam E1-E2 ATPase 419 611 - -
Dod03g2999 963 SFLD p-type atpase 617 894 IPR044492 -
Dod03g2999 963 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 348 951 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g2999 963 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 25 960 - -
Dod03g2999 963 ProSitePatterns Heavy-metal-associated domain. 113 142 IPR017969 GO:0046872
Dod03g2999 963 PRINTS Copper-transporting ATPase 1 signature 34 59 - -
Dod03g2999 963 PRINTS Copper-transporting ATPase 1 signature 60 83 - -
Dod03g2999 963 PRINTS Copper-transporting ATPase 1 signature 131 152 - -
Dod03g2999 963 PRINTS Copper-transporting ATPase 1 signature 89 109 - -
Dod03g2999 963 Gene3D - 602 898 IPR023214 -
Dod03g2999 963 SUPERFAMILY HAD-like 633 948 IPR036412 -
Dod03g2999 963 ProSiteProfiles Heavy-metal-associated domain profile. 108 174 IPR006121 GO:0046872
Dod03g2999 963 SFLD Haloacid Dehalogenase 617 894 - -
Dod03g2999 963 SUPERFAMILY HMA, heavy metal-associated domain 103 174 IPR036163 GO:0046872
Dod03g2999 963 ProSiteProfiles Heavy-metal-associated domain profile. 183 249 IPR006121 GO:0046872
Dod03g2999 963 SUPERFAMILY Calcium ATPase, transduction domain A 435 521 IPR008250 -
Dod03g2999 963 Gene3D - 32 102 - -
Dod03g2999 963 SUPERFAMILY HMA, heavy metal-associated domain 178 245 IPR036163 GO:0046872
Dod03g2999 963 SUPERFAMILY Calcium ATPase, transmembrane domain M 380 627 IPR023298 -
Dod03g2999 963 Pfam Heavy-metal-associated domain 110 170 IPR006121 GO:0046872
Dod03g2999 963 Pfam Heavy-metal-associated domain 37 96 IPR006121 GO:0046872
Dod03g2999 963 SUPERFAMILY HMA, heavy metal-associated domain 34 103 IPR036163 GO:0046872
Dod03g2999 963 PRINTS P-type cation-transporting ATPase superfamily signature 767 778 - -
Dod03g2999 963 PRINTS P-type cation-transporting ATPase superfamily signature 842 861 - -
Dod03g2999 963 PRINTS P-type cation-transporting ATPase superfamily signature 789 799 - -
Dod03g2999 963 PRINTS P-type cation-transporting ATPase superfamily signature 635 649 - -
Dod03g2999 963 PRINTS P-type cation-transporting ATPase superfamily signature 471 485 - -
Dod03g2999 963 PRINTS P-type cation-transporting ATPase superfamily signature 865 877 - -
Dod03g2999 963 CDD HMA 37 98 IPR006121 GO:0046872
Dod03g2999 963 PANTHER ATP7, ISOFORM B 25 960 - -
Dod03g2999 963 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 388 919 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g2999 963 ProSitePatterns E1-E2 ATPases phosphorylation site. 637 643 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2999 Dod-Chr3 62290033 62295520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2999 29 957 Primary Pumps ATPases AT1G63440 55.829 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2999 K17686 - gmx:100793894 1556.58