Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2989 ATGTATTGTACAATGAGGAAGCCCGAGCAATCAGCTTCAGCTGCGACAAAAAACAACAATAGCAATAAGCTAAGGAAGGGGCTGTGGTCACCAGAGGAAGATGACAAGCTGATGAGCTACATGGTGAACAACGGACAAGGTTGTTGGAGCGATGTGGCAAGGAATGCTGGGTTGCAAAGGTGTGGCAAAAGTTGTCGGCTTCGATGGATCAATTACTTGAGGCCTGATCTTAAACGAGGCGCATTCTCTCCTCAAGAAGAGGAACTCATCGTCCACCTCCATTCCCTTCTTGGAAACAGATGGTCGCAAATAGCTGCGCGTTTACCTGGACGCACTGACAATGAAATAAAGAACTTCTGGAACTCAACAATAAAGAAAAGACTCAAGAACCAGTCCTCCAAAACTTCACCAAACGCAGGCGAGTCCTCATATGAGCCTAACAACAACATGGGAGGGTTTAATTCTACGCAATTTCAACATGCTGATCATCACTTCATGCCAATGTTCAATTCATCTAGTCCATCACCATCAATGCAAGCCACAGTTCTCAACACCATAATTGACAGGTTGCCTATGCTAGAGCATGGTCTAAACATGCCAACACCTGGTGGAGGTGGTGGATTCTTCAAAGGTGTAGGGCCAACAAGCTTCTGTGATGGAGTTGACAACAATAAAGACTTTTATTTGGAAAATGGAGTCTTTGGGATTGGGAGTGTAAATATTGGTGCGGCTGAAGGGGAGATGTTTGTTCCTCCTCTAGAGAGTGTTAGCACTACTTCTGACCATAACCTCAAAGTGGAGAGTGTGTGCAATACAGACACTAACAATAGTTATTTTGATGACATAAACAGCATCGTTAATAACTGCAATCTTAGCGGCAATAAGAGATCAGCTGGGGTGGAGAACTTGTTCCAGGAAGAGTTGACAATGGGAGAGTGGGACTTGGAGGAGTTGATGAAAGATGTGTCCTCCTTTCCCTTTCTTGATTTTTCAAATTGA 999 0.4424 MYCTMRKPEQSASAATKNNNSNKLRKGLWSPEEDDKLMSYMVNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIVHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNQSSKTSPNAGESSYEPNNNMGGFNSTQFQHADHHFMPMFNSSSPSPSMQATVLNTIIDRLPMLEHGLNMPTPGGGGGFFKGVGPTSFCDGVDNNKDFYLENGVFGIGSVNIGAAEGEMFVPPLESVSTTSDHNLKVESVCNTDTNNSYFDDINSIVNNCNLSGNKRSAGVENLFQEELTMGEWDLEELMKDVSSFPFLDFSN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2989 332 MobiDBLite consensus disorder prediction 127 157 - -
Dod03g2989 332 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Dod03g2989 332 MobiDBLite consensus disorder prediction 7 27 - -
Dod03g2989 332 Gene3D - 23 79 - -
Dod03g2989 332 CDD SANT 29 73 IPR001005 -
Dod03g2989 332 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Dod03g2989 332 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Dod03g2989 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Dod03g2989 332 SMART sant 25 75 IPR001005 -
Dod03g2989 332 SMART sant 78 126 IPR001005 -
Dod03g2989 332 MobiDBLite consensus disorder prediction 9 26 - -
Dod03g2989 332 Gene3D - 80 149 - -
Dod03g2989 332 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Dod03g2989 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Dod03g2989 332 PANTHER MYB DOMAIN PROTEIN 55 5 331 - -
Dod03g2989 332 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Dod03g2989 332 CDD SANT 81 121 IPR001005 -
Dod03g2989 332 PANTHER MYB TRANSCRIPTION FACTOR 5 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2989 Dod-Chr3 62160985 62164733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2989 4 330 MYB Transcription Factor Family AT3G08500 44.350 5.45e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod03g2989 Myb_DNA-binding 4.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2989 K09422 - gmx:100786151 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2989 03 62160985 62164733 Dod03g2989 03 62160985 62164733 ECH
Dod10g1770 10 38817226 38819524 Dod03g2989 03 62160985 62164733 ECH
Dod10g1770 10 38817226 38819524 Dod03g2989 03 62160985 62164733 PCT