Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2988 ATGGCCTCTATAGCCCTCACCACAGCCACCACGACCACCCTCCCCTCGCTCCGCCTCCGCTCCTTCTCACCCGAACACCCACCACTCTCCCACTCCCTCCCCTCCACTTCCCCCACTCTCAAACCCCTCACACTAAAACGACACCGTTCCGTTTCCCCACTCTCCAATGTTTCTACCTTCAAACCTAATTGTTGGAAACACTCCATCGTCAGAGCCTCCGCCACCGGAGCTTCGATCACTCCGGCACCGGCACCACCTCAGCCATGGCAAGGCGCCGCCATGAAACCACTACTGGCCTCCATAGCCACCGGCGTCATCATCTGGTTCTCCCCAGTTCCCACCGGCGTCTCCCGAAACGCCTGGCAGCTCCTCGCGATCTTCCTCGGCACCATCGTCGGGATTATCACGCAGCCTCTCCCTCTCGGCGCCGTCGCAATCCTAGGCCTCGGCGTGTCCGTCCTCACCAAAACCCTACCCTTCGTGTCGGCGTTCTCCGGGTTCGGCGACCCGATCCCGTGGCTCATCTGCCTCGCCTTCTTCTTCGCCAAGGGATTCATCAAAACAGGGCTCGGTAACCGCGTCGCGTACCAGTTCGTCTCCCTCTTCGGCAGCTCCTCGCTGGGGTTAGGGTACAGCCTCGTATTCAGCGAGGCTCTCCTTGCGCCGGCGATCCCGTCGGTTTCCGCGCGCTCCGGCGGGATCTTCCTCCCGCTGGTGAAGTCTCTCTGCGTCGCGTGCGGCAGCAACGTCGGCGACGGCACGGAGGAGAGGCTCGGGTCGTGGCTGATGCTGACGTGTTTTCAGACGTCGGTGATATCGTCGGCGATGTTCTTGACGGCGATGGCCGCGAATCCGTTGTGTGCTACTCTGACTCAGAATGCGATTAATAAGAGTATTGGGTGGGTGGACTGGGCGAAGGCTGGGATTGTTCCTGGGTTGGTGTCGTTGGTGGTTGTGCCGTTGATATTGTATGTAATTTACCCGCCGAAATTGAAGAGTAGCCCCGACGCGCCAAAGCTTGCGAGGGAGAAGTTGGAGAAGATGGGTCCCATGACTGCCAATGAGAAGATCATGACTGGGACCTTGCTTCTTACGGTGGGACTTTGGATATTTGGAGGCCTTCTTAATGTTGATGCCGTAAGTGCTGCCATTCTTGGATTAGCTGTACTCCTTGTCACTGGGGTTGTCACATGGAAGGAGTGCTTGGCTGAGGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATTGCTATGGCTGGTTATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTTGGGATCCTCATTCTTCTCTACTTCTACTCACATTACTTCTTTGCGAGTGGAGCTGCTCATATTGGGGCCATGTTTACTGCATTCTTGTCTGTTGCTACTGCTCTGGGAACTCCACCATACTTTGGAGCCATGGTGCTTTCCTTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGGATTGGGTCAGCTCCTGTATTTTACGGTGCCAACTATGTTCCACTTGCTAAATGGTGGGGTTATGGATTCCTTATTAGTATTGTTAACATTATAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1680 0.5476 MASIALTTATTTTLPSLRLRSFSPEHPPLSHSLPSTSPTLKPLTLKRHRSVSPLSNVSTFKPNCWKHSIVRASATGASITPAPAPPQPWQGAAMKPLLASIATGVIIWFSPVPTGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFVSAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARSGGIFLPLVKSLCVACGSNVGDGTEERLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTQNAINKSIGWVDWAKAGIVPGLVSLVVVPLILYVIYPPKLKSSPDAPKLAREKLEKMGPMTANEKIMTGTLLLTVGLWIFGGLLNVDAVSAAILGLAVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILILLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPYFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKAIGLW* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2988 559 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 69 559 - -
Dod03g2988 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 69 559 IPR030676 -
Dod03g2988 559 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 111 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Dod03g2988 559 CDD ArsB_NhaD_permease 131 553 - -
Dod03g2988 559 Pfam Sodium:sulfate symporter transmembrane region 96 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
Dod03g2988 559 MobiDBLite consensus disorder prediction 17 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2988 Dod-Chr3 62138593 62141851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2988 1 558 Antiporters AT5G12860 78.508 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2988 - - gmx:100793559 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2988 03 62138593 62141851 Dod03g2988 03 62138593 62141851 ECH