Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2986 ATGGGAGTTCGTTGCTCTAAATTCTCTCTTTGTTGGTGGCCTTCCAACATCGAATCAAACCTTCATGACTTGTCTGATAATGATGATGGTGCCAGAAATGAGAAGAATCAATGGTTTGGTTTCACTGAGTACACATGGGATCAACTTAAGGTTTCCACCTCAGGATTCTCACCAGACAACATTGTATCAGAACATGGTGAAAAGGCTCCAAATGTTGTCTACCTAGGAAGACTTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCACCAAGTCAGCTTGGCCTGATTCTCGACAGTTCCTAGCGGAAGCAAGAGCTGTGGGGCAGTTAAGGAGTGAAAGATTGGCTAACTTGGTTGGATGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCGGAGTTCATGCCCAATGAGACTCTCTCCAAACATCTTTTTCACTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGGGTGGCATTGTATTTGGCACAAGCATTGGAATACTGCAGCAGTAGAGGAAGGGCATTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGATGAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAGAACAGTAGAGATGGCAGAAGTTATAGCACAAATTTAGCCTTCACTCCTCCGGAGTACTTGAGGACAGGAAGAATCACCCCTGAAAGTGTAGTTTACAGTTTTGGCACACTTTTGCTTGATCTTCTGAGTGGAAAGCATATCCCACCGTGTCATGCACTTGACCTTATACAAGGCAAAAATTTTTCGTTGCTGATGGACTCCTGTTTAGAAGGTCATTTTTCAAATGATGATGGAACCGAGTTAGTGAGATTAGCTTCGCGTTGTTTACAACTTGAACCTCGTGAGAGACCAAACTCTAAGTCACTTGTGACTGCTTTAACTCCTCTTCAGAAAGAAACTTCAGTACCTTCATATGTTTTGATGGGCATACCAGATGGGACTGTATCATGCAAGGAAACAGTTTCCGTGACACCTTTTGGTGATGCTTGTTCAGGAAGAGATCTCACTGCAATTCATGAAATTTTGGAAAAGGTGGGGTACAAGGATGATGAAGGTGTTGCAAATGAGGTAATTCATTATTTCTCAGGATTATTTTAA 1149 0.4282 MGVRCSKFSLCWWPSNIESNLHDLSDNDDGARNEKNQWFGFTEYTWDQLKVSTSGFSPDNIVSEHGEKAPNVVYLGRLEDDRLVAVKRFTKSAWPDSRQFLAEARAVGQLRSERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALYLAQALEYCSSRGRALYHDLNAYRILFDEDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPCHALDLIQGKNFSLLMDSCLEGHFSNDDGTELVRLASRCLQLEPRERPNSKSLVTALTPLQKETSVPSYVLMGIPDGTVSCKETVSVTPFGDACSGRDLTAIHEILEKVGYKDDEGVANEVIHYFSGLF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2986 382 SUPERFAMILY Protein kinase-like (PK-like) 36 317 IPR011009 -
Dod03g2986 382 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Dod03g2986 382 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Dod03g2986 382 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Dod03g2986 382 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 374 IPR045845 GO:0004672|GO:0009742
Dod03g2986 382 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 374 - -
Dod03g2986 382 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2986 Dod-Chr3 62125754 62128379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2986 14 340 Glycoside Hydrolase AT3G07070 31.073 1.82e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod03g2986 PK_Tyr_Ser-Thr 3.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2986 - - gmx:732542 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2986 03 62125754 62128379 Dod03g2986 03 62125754 62128379 ECH