Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2975 ATGAAGCAAATGGAACTTGAGAAAGCACCTATTTTGGAAGCAGGGTCTAGGCAAGAAACTGAGATAACCGTTGCCTTTCAGAAACCGGATCCTCTACCAATGACAGTGGAGTCATCATGCGGTTCTGTTTGTCCTTTTTCCAGGCAAGAGAACAGTGTTGTGGCATCCACAGAGTCATCAAAGTCAGCAAAGAAACTTTGTGGACTCATTGTTTTCTATGCTATTGTTATGCTTGTGGAAGTTGTTGGTGGAATAAAAGCCAACAGCCTAGCAGTCATTAGTGATGCAGCACACTTGCTTTCTGATATTGGTGGATTCTGCATCTCTCTCTTTGCAGTATGGGCTTCAGGTTGGGAGGCAACACCACATCAGTCTTTCGGATACAATCGGCTAGAGGTTTTGGGTGCTCTTTTATCTGTGCAGTTAATCTGGGGGATATCTGGTTTTTTAATATATGAAGCAGTTGGTCGAATTCTTTACCGCAATGCCGGGGTGAATGGAATGCTCATGTTTGCAATTGCAGCATTCGGGTTTGTTCTTAACTTTATCATGGTTGTATGGCTTGGTCATGATCATATTCATATTCATAGCCGTCATCATGGTTGCGGAGAATCAGGTTATGATCATGTTCATGGTGATCATCATGGCTGTGGAGAATCAGGACATGATCATGATCATGGGAAGGAGGAACTATATAAAATAACCGATGAAGAGGAGCTTATCATGCTTTCAAGTAGTCAGAGAAATATTAATGCCTTGAACATAAATCTCCAAGGGGCCTATTTGCATGTTATGACTGATCTGATTCAATCTGTTGGGGTGATGATTGCTGGAGTCATAATATGGGCTAAACCAGGATGGTTAGTGGTTGACCTGGTGTGTACACTCATATTCTCTGTTATATCTTTAAGTACTACTCTGCCCATGCTTAGGAATATCTTCGGCATTCTGATGGAGAGGACACCAACTGAGATCAATCTCACTGAGCTGGAAAATGGCCTCAGAAGTATCAAAGGAGTGCAAGGCATTCATGACTTGCACGTTTGGGCCATAACAGTTGGAAAAACTGTTTTATCTTGCCATGTAGTGGCTGAGCCTGGCATCAGTTCCATAGATTTACTTGGCCGGATTAAGTACTATTGTGAAAAAACATATAAAATACAGCATGTAACCATACAAATTGAGTGA 1188 0.4184 MKQMELEKAPILEAGSRQETEITVAFQKPDPLPMTVESSCGSVCPFSRQENSVVASTESSKSAKKLCGLIVFYAIVMLVEVVGGIKANSLAVISDAAHLLSDIGGFCISLFAVWASGWEATPHQSFGYNRLEVLGALLSVQLIWGISGFLIYEAVGRILYRNAGVNGMLMFAIAAFGFVLNFIMVVWLGHDHIHIHSRHHGCGESGYDHVHGDHHGCGESGHDHDHGKEELYKITDEEELIMLSSSQRNINALNINLQGAYLHVMTDLIQSVGVMIAGVIIWAKPGWLVVDLVCTLIFSVISLSTTLPMLRNIFGILMERTPTEINLTELENGLRSIKGVQGIHDLHVWAITVGKTVLSCHVVAEPGISSIDLLGRIKYYCEKTYKIQHVTIQIE* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2975 395 SUPERFAMILY Cation efflux protein transmembrane domain-like 63 319 IPR027469 -
Dod03g2975 395 TIGRFAM CDF: cation diffusion facilitator family transporter 64 395 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Dod03g2975 395 PANTHER METAL TOLERANCE PROTEIN B 4 395 - -
Dod03g2975 395 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 395 - -
Dod03g2975 395 Pfam Cation efflux family 70 318 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Dod03g2975 395 Gene3D Cation efflux protein transmembrane domain 62 317 IPR027469 -
Dod03g2975 395 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 324 395 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2975 Dod-Chr3 62013105 62015235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2975 4 395 Inorganic Solute Cotransporters AT2G29410 48.101 3.41e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2975 K14689 - gmx:100777590 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2975 03 62013105 62015235 Dod03g2975 03 62013105 62015235 ECH