Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2969 ATGGAGTCTGACGATCATGATCATCATCAACCAACACCAGCATCAGAAAAGCATGTTATTACTGCAAGTGATGGTGATGAACAAGGTTCAAGCCAAGTAACCCCAAGGTCGTACGAGTGCAACTTCTGCAAGAGAGGGTTCTCTAATGCACAAGCACTGGGAGGGCACATGAACATCCACAGGAAGGACAAAGCAAAGCTCAAGCAGCAATCTCAACAACAACCTTTGGACATTCATCATCACAATAAGGTCCCCCCAATATTGGAGGGCAAGTCTAATAAAGAGCGAACAAATAATGATCCAAATTGGCCTTATTGGAATGTGTCTCAAATATCAAGAGAAGAATCACTTGTAGTTCACACGAGGCAGCTCCCTCTCTTTGCTGAATCACCAGATACGCAAACACAGCCAGAGGGTCAAAGGGGTAATTTTCCATCTGGCCATCATGGTTCCTCATCATCGGAGTTAGACCTTGAACTCAGGCTAGGGCCTGAGCCACATGATCACTCATCAACGGGTACCAGAAAATTCCTTTGA 537 0.4525 MESDDHDHHQPTPASEKHVITASDGDEQGSSQVTPRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSQQQPLDIHHHNKVPPILEGKSNKERTNNDPNWPYWNVSQISREESLVVHTRQLPLFAESPDTQTQPEGQRGNFPSGHHGSSSSELDLELRLGPEPHDHSSTGTRKFL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2969 178 MobiDBLite consensus disorder prediction 1 35 - -
Dod03g2969 178 MobiDBLite consensus disorder prediction 54 101 - -
Dod03g2969 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Dod03g2969 178 MobiDBLite consensus disorder prediction 123 178 - -
Dod03g2969 178 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 15 100 - -
Dod03g2969 178 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Dod03g2969 178 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Dod03g2969 178 MobiDBLite consensus disorder prediction 127 153 - -
Dod03g2969 178 Pfam C2H2-type zinc finger 38 62 - -
Dod03g2969 178 Gene3D Classic Zinc Finger 15 99 - -
Dod03g2969 178 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 123 171 - -
Dod03g2969 178 MobiDBLite consensus disorder prediction 82 96 - -
Dod03g2969 178 MobiDBLite consensus disorder prediction 160 178 - -
Dod03g2969 178 PANTHER OS07G0101800 PROTEIN 15 100 - -
Dod03g2969 178 PANTHER OS07G0101800 PROTEIN 123 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2969 Dod-Chr3 61947537 61948073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2969 35 70 C2H2 Transcription Factor Family AT3G09290 77.778 3.49e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod03g2969 zf-C2H2_6 1.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2969 - - vun:114170729 155.992