Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2961 ATGGCTTTCGAAGGGCTTCAAAAAAAGACAGTAATTGAGATCTCCATGTCTGATGTTCAAGAGGATGAGGACCATGCCTTGAGGAAGATTTGCTTGAGAGCTAAGGATGGTGAAGGGAGGAATGGAATGGATTTTACAACGGATAAGATGTTCTGCACTGGGTTTACTAAGAGACGTTTTAATCAGATGAAGAGAACCTGCTATGGTCAAGCTAGGAAGATTCAACAGATTCGCAGGAAGATGAGGGAGATCATGACCAATGCAGCAATATGTTGTCATATTAAAGAGTTGATCCGTAAATTCATTGCTAAGAAGAGTGGAAAAGAGATTGAGAAGGCAACTATATTCAACATCAATTCAAGTTTGTGGAATGAAGCAATGTTCCCAAAATTGAGGTTGAAATCGTAG 408 0.3971 MAFEGLQKKTVIEISMSDVQEDEDHALRKICLRAKDGEGRNGMDFTTDKMFCTGFTKRRFNQMKRTCYGQARKIQQIRRKMREIMTNAAICCHIKELIRKFIAKKSGKEIEKATIFNINSSLWNEAMFPKLRLKS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2961 135 PANTHER 40S RIBOSOMAL PROTEIN S3A 7 50 - -
Dod03g2961 135 PANTHER 40S RIBOSOMAL PROTEIN S3A 44 115 - -
Dod03g2961 135 Pfam Ribosomal S3Ae family 49 114 IPR001593 GO:0003735|GO:0005840|GO:0006412
Dod03g2961 135 SMART Ribosomal_S3Ae_2 1 126 IPR001593 GO:0003735|GO:0005840|GO:0006412
Dod03g2961 135 PANTHER 40S RIBOSOMAL PROTEIN S3A 7 50 - -
Dod03g2961 135 PANTHER 40S RIBOSOMAL PROTEIN S3A 44 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2961 Dod-Chr3 61867035 61868449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2961 1 114 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 48.980 1.05e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2961 K02984 - jre:109005069 139.043