Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2954 ATGAGCGGTTACCAAGACGATGAGCGGGTCACGGAGTGGGAGATGGGCCTGCCCGCGGCCCACGATCTCACCCCTCTCTCCCAGCTGCTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTCGCCCGAGCCCCATCGATCCCTCGTCGACGTCAACCGCGCCTCCCGGAGCACCGTCTCCACCCTCCGCGGCGGTGCTCAAGCCTTCTCCTCCTCCGCCAACAACAACAACAACCACCACCACCTCAATCCCTTCCCTGACGACGACGACGACGATCTCGATGACAACGGAGAAGAGATCGATCCGAACGATTCGCGGAAGCTCCGAAAGATCGATTGCGCGGCGGAGGAGGCCGATTCGGAGCCGCGCAACGACGGCGGCGGCGGCGTCGGGACGGTGAAGCGGACGCGGCTGGTGTGGACGCCGCAGCTGCACAAGCGGTTCGTGGAAGTGGTGGCGCACCTAGGGATCAAGAACGCGGTTCCGAAGACGATCATGCAGCTGATGAACGTGGAAGGTTTGACGCGAGAGAATGTCGCGAGCCATCTCCAGAAGTACCGGCTTTACCTGAAGAGGATGCAGCAGGGGCTCTCCTCGGAAGGACCTTCTTCTACCGACCACCTCTTCGCCTCCACGCCGGTGCCGCAGAGCTTGAACGACAGCGGCGGCGGAGGAAGTGGTCACTTCCGTGGTAACGGCCACCACCTCCCCGTTCCGATTCATGTGCCGTACCCTCCGCCGCAGATGATGCAAATGCCGACGGTGATCGGCATGCCACACGGCCATGGCGGGTATCATCATCATGGATTTGAGTCTTATTCATACAATCTGTTGCAGCAGAGGGATTGGTCTGCTAATAAGTAA 867 0.6148 MSGYQDDERVTEWEMGLPAAHDLTPLSQLLIPPELASAFSISPEPHRSLVDVNRASRSTVSTLRGGAQAFSSSANNNNNHHHLNPFPDDDDDDLDDNGEEIDPNDSRKLRKIDCAAEEADSEPRNDGGGGVGTVKRTRLVWTPQLHKRFVEVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQQGLSSEGPSSTDHLFASTPVPQSLNDSGGGGSGHFRGNGHHLPVPIHVPYPPPQMMQMPTVIGMPHGHGGYHHHGFESYSYNLLQQRDWSANK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2954 288 MobiDBLite consensus disorder prediction 198 237 - -
Dod03g2954 288 MobiDBLite consensus disorder prediction 69 110 - -
Dod03g2954 288 Gene3D - 133 195 - -
Dod03g2954 288 Pfam Myb-like DNA-binding domain 140 188 IPR001005 -
Dod03g2954 288 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 189 IPR006447 GO:0003677
Dod03g2954 288 MobiDBLite consensus disorder prediction 198 224 - -
Dod03g2954 288 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 287 - -
Dod03g2954 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 192 IPR017930 -
Dod03g2954 288 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 287 IPR044841 GO:0003700|GO:0006355
Dod03g2954 288 SUPERFAMILY Homeodomain-like 133 193 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2954 Dod-Chr3 61849488 61850354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2954 6 269 G2-like Transcription Factor Family AT3G46640 54.480 7.52e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod03g2954 Myb_DNA-binding 6.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2954 - - zju:107411020 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2954 03 61849488 61850354 Dod03g2954 03 61849488 61850354 ECH