Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2945 ATGGAGAATTATCCCGGTTCAATGAACGGATTCATATTTGAGAATGGTCCTATCTCAGTATTCTCAAATCAGAACCAAGGAAACGGGTTCAAGTTTGAGGATTCATCTTCTTCCCCTTCTAACCAATCAAACAATTCAGAATCCCCTAGTGATTCTGGTGGCACAAGCTCACCAAATGCAGAACACACAGAGAGTACCAAGTATTCCAACCCCGTCCTCAAATATATAAGCGAGATCCTCATGGATGAGGAAGATGATTTGGAGCGCAAGCCTTGTATGTTGCAGGATTGTTTGAAGCTCCAAGCTGCTGAAAAATCATTCTATGATGTGTTGGGTAGTAGCAACCCTTCATCAAACTCTAAGGTCCATGGTTGTTTCAATGATGATGGCCATGACCCTGATGATAATTTTGGTAGAACTACTAGTTCTGAGAGCAATAGTAGCAGCTATACCACTGATAATTCCTCATATGAGTCTGATTGGATGAATGGTGGGGGTGATTTTGAGTCTTCTTTCCTTCATAGGTCTCTAGTTGAGTCCACAGGAAACACCTATGAGGTTCTAGATGTAGCTAGTACTAAATTTAGGGACACATATGGTTCTGTTTCTGGCCTTTTTCAAAATGGAACTTGGAATAATATCTTTTACTCTCCAAGCATGCCGTCTATGATTGAAGCAGGTAGGGGAACAAGGGAAAAGAGAAGCCATCATATGGATGGTGTCAAACATGAAGAAGGGGAGAGAGGAACCAAACTCTCAGCTGTGTACAATGAGGACTCTGAGCCATCAGAGATGTTTGATGAGGTGCTGCTTTGTCAGGATGGGAAAAGTCCAGCCATTTTTTGTGCTGACCGTGAACCATCATTGTATGTTGCTGCTGATCACTCAGGTGGATCCAATGGAAAGACAAGCCGTTCAAAGAAAGGTACCAACAAAGGTGGAACCACAAGTACTGCAACAGTGGATTTGTGGACTCTCCTAACTCAGTGTGCACAAGCTGTTGCAAGCTATGACCAAAGGAGTGCAAATGAGATACTTAAGCAGATTAGGCAGCACTCTCCACCTTCTGGTGATGGACTACAGCGTTTGGCTCATTACTTTGCCAATGGCCTTGAGACAAGGTTAGCTGCTGGGACACCAAAGTATATGCTCCTTCAGTCGGCATCTGCTGCAGATATGTTAAAGGCTTACAAAGTGTACATCACAGCATCTCCATTTCCCAGGATGTCGAATTTCTTGGCTAACAGAACTATTCTGAAGCTGGCAGAAAATAAGAGCAGCCTTCACATTATTGACTTCGGTGTTTTCTATGGTTTCCAGTGGCCTTGCCTCATCCAGCGCCTTTCGGAAAGACCGGGCGGGCCACCAAGGCTTCGAATCACAGGAATTGATCTTCCTCAGCCTGGATTTAGGCCTACAGAAAGGGTTGAGGAGACAGGGCGGCGCCTGGAGAACTACTGCAATAGGTTCAAGGTCCCATTTGAGTACAAGTGCCTTGCACAGAAGTGGGAAACCATAAGGCTTGAGGATCTCAATATTGATAGGAATGAAGTGACAGTGGTTAACTGTTTGCATAGATTGAAGAACCTTTCTGATGAAACTGTGACTGTGAACTGTCCAAGGGATGCTGTGTTAAGGTTGATCAGGAAGATTAATCCAAACATCTTCATCCATGGGGTGGTCAATGGCACTTACAATGCCCCATTTTTCCTCACCAGGTTCAGGGAGGCACTGTTCCACTTCTCAGCATTGTTTGATATGTTTGAGGCCACTGTGCCCCGTGAAGATCCACATAGGCTCATGTTTGAGAAAGGATTGTTTGGAAGGGATGCCATCAATGTCATAGCATGTGAAGGAGCTGAAAGGGTTGAAAGGCCAGAGACCTACAAGCAGTGGCAAGTTAGGAACCAGAGAGCAGGTTTCAAGCAAATTCCGATTGCCCCAGAACTCTCTAATAGAGTCAAACAGATGGTGAAAAAGGAGTATCATAAAGATTTTGTTGTTGATGAGGATGGCAAGTGGATCTTGCAGGGATGGAAAGGGCGTATTCTCCATGCTCTTTCTTCTTGGGTTCCTGCTTAG 2082 0.4462 MENYPGSMNGFIFENGPISVFSNQNQGNGFKFEDSSSSPSNQSNNSESPSDSGGTSSPNAEHTESTKYSNPVLKYISEILMDEEDDLERKPCMLQDCLKLQAAEKSFYDVLGSSNPSSNSKVHGCFNDDGHDPDDNFGRTTSSESNSSSYTTDNSSYESDWMNGGGDFESSFLHRSLVESTGNTYEVLDVASTKFRDTYGSVSGLFQNGTWNNIFYSPSMPSMIEAGRGTREKRSHHMDGVKHEEGERGTKLSAVYNEDSEPSEMFDEVLLCQDGKSPAIFCADREPSLYVAADHSGGSNGKTSRSKKGTNKGGTTSTATVDLWTLLTQCAQAVASYDQRSANEILKQIRQHSPPSGDGLQRLAHYFANGLETRLAAGTPKYMLLQSASAADMLKAYKVYITASPFPRMSNFLANRTILKLAENKSSLHIIDFGVFYGFQWPCLIQRLSERPGGPPRLRITGIDLPQPGFRPTERVEETGRRLENYCNRFKVPFEYKCLAQKWETIRLEDLNIDRNEVTVVNCLHRLKNLSDETVTVNCPRDAVLRLIRKINPNIFIHGVVNGTYNAPFFLTRFREALFHFSALFDMFEATVPREDPHRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQIPIAPELSNRVKQMVKKEYHKDFVVDEDGKWILQGWKGRILHALSSWVPA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2945 693 MobiDBLite consensus disorder prediction 139 158 - -
Dod03g2945 693 MobiDBLite consensus disorder prediction 23 68 - -
Dod03g2945 693 Pfam GRAS domain family 325 690 IPR005202 -
Dod03g2945 693 ProSiteProfiles GRAS family profile. 314 691 IPR005202 -
Dod03g2945 693 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 692 - -
Dod03g2945 693 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 692 IPR005202 -
Dod03g2945 693 MobiDBLite consensus disorder prediction 115 158 - -
Dod03g2945 693 MobiDBLite consensus disorder prediction 297 316 - -
Dod03g2945 693 MobiDBLite consensus disorder prediction 293 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2945 Dod-Chr3 61700927 61703506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2945 68 692 GRAS Transcription Factor Family AT2G29060 45.540 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g2945 GRAS 8.4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2945 - - gmx:100815586 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2945 03 61700927 61703506 Dod03g2945 03 61700927 61703506 ECH
Dod03g2945 03 61700927 61703506 Dod10g1736 10 38484308 38487029 PCT