Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2943 ATGCCTTTGATGGATCCTAATTTCCAGTCCGGTTTCATCAATGGATTTAGATTCAACCAAGTGCCAATTATCCCAAATGTTGACCCAGTAAATGGGGTGGAATCAATTAAATTTGGATTCATGGATAACCCGTTTCTTCGTCCACCTGATCCAAACAGTGCTCAAAACCATTCTTCCTTGTCCACCGGTACTGCAGATGAAGACTCTCCTTTGGATGAGGCTGATTTCTCTGCAACCATTCTGCGGTACATGAACCAGATGCTGATGGAAGAGGACATGGAGGAGAAGCCTTGTATGTTCCATGATTCATTGGCTCTCCAAGCTGCTGAGAAATCATTGTATGATGTCATTGGGGAGACATACCCTCCTCCTTTTTCTTCCTCTTCCATGCAGCATCATGTTCAAAACTATCACAATGTGGAGAGCCCTGATGATAGCCTCTCTGGTAACTTCAGTGGTTATAGCAGTGGCGGTACAACTAGTACCAGCAACTCATTTGAGTCACAGTGGAGTAACTTTGACTCTGCAGAGTATAAGCCTTCTATACTGCAAACCACTTTTCCTGCTGACTTTGTTTTCCAGGCCAGTTCAACCCCTGGCTCCCAATCTTCCATGAACAGGAGGAGCAGCTTCACTACAGGAAAGAATAGTGCTGGTGGATTATTGGGGAGTTCAAGTGCTGGATTTTTAGACTCAACAACATTGTTTAGCAAGAGTGACTCGATGCTGCAGTTTGAGAGGGGCATGGAGGAAGCCAGTAAGTTTCTGCCCAAGGGGAATCCATTGGTTATTGACCTGGAGAATGGTATGTTTACCCGTTCTCCTCAAAGTGCTCCTCCTCGGCAGGTGGTAGTTAAGAAGGAGAGAGATGAAAGGGAGCAATTTTCTGTGGAGTCAAAAGTGAGGAAGAATCATGAGCGGGAAGATGAAGCTGAATTACAAGATGGGAGGAGCAACAAGCAATCTGCAATTTACAGGGAAGACAGTGAGCTATCTGAATTGTTTGACAAGGTGCTGTTATGCGCGGATTATAGAAAAGAGGAACCTACTGCATGCTCTTCTAATGAAGACCAACCCAATGGACCTGAAAAGATTGTGCAACAAAAGGAAGAAACTAACAAGTCTAGTGGTGGAAAGAGTCGAGTTAAGAAACAGGGCAATAAGAAGGGAGTAGTGGATCTGAGGACACTGTTGATTCTGTGTGCACAATCTGTTTCTTCTGATGATCGTGCAACTGCTAATGAGTTATTGAAGCAGATTAGCCAGCATTCTTCTCCTCTGGGTGATGGGTCTCAGAGGCTGGCACATTGCTTTGCAAATGCCCTTGAAGCACGCTTGTCTGGCACTGGTGCCCAGATTTATACTGCTCTGTCCTCCAAAAGAACCTCTGCTACAGACATGGTGAAAGCGTACCAAATGTTTATGTCAGCCTGCCCATTCACGAGGCTTGGGCGCATTTTTGCAAACCATACAATTTTGAACCTAGCCAAGGCCAAGGAGGTGGAAACTCTTCATATTGTAGATTTTGGTATACGTTATGGCTTCCAGTGGCCTGGCCTTATTTATCGTCTATCAAAAATAGCTGGTGGGCCTCCCAAGCTGCGCTTGACGGGGATAGAACTTCCACAATCAGGTTTCAGGCCGGCAGAGAGAGTCCAGGAGACAGGGCGTCGCCTGGCAAGGTATTGTGAGCGTTTTAATGTTCCGTTTGACTTCATTGCTATTGCACAGAAATGGGAAACCATCAAAATTGAGGACCTGAAGATAAAGGAAAATGAACTTCTTGTGGTGAATTGCATGCTTCGATTTGAGAATCTACTTGATGAAACTGTTGTGTTGAGTAGTCCCAGGGATGCTGTTTTGAATTTAATTAGGAAGGCCAATCCTGCTATATTTATACATGCTACTGTCAATGGGAACTACAATGCCCCATTCTTTGTGACGCGGTTCCGGGAGGCTGTTTTTCATTACTCTACATTGTTTGATGTGCTCGACACCAATGTTGCTCGTGAAGATCCAATGAGGTTGATGCTTGAGAGGGAGTTCTTTGGGCGTGAGGTAATGAATATTATAGCTTGTGAGGGTTCTGAGAGGGTTGAGAGGCCCGAGACATACAAGCAATGGCAGGTTCGGAACATGAGGGCAGGGTTTAGGCAACTCCCTTTGGATCACCATCTCATTCACATGTTAAGAGACAAGCTGAGAGATAATTACCACAGTGATTTCATGCTTGATGTGGATGGCAACTACATGCTGCAAGGTTGGAAGGGCCGAATCATTTATGCTTTCTCTTGTTGGGTACCGGCATAG 2310 0.4519 MPLMDPNFQSGFINGFRFNQVPIIPNVDPVNGVESIKFGFMDNPFLRPPDPNSAQNHSSLSTGTADEDSPLDEADFSATILRYMNQMLMEEDMEEKPCMFHDSLALQAAEKSLYDVIGETYPPPFSSSSMQHHVQNYHNVESPDDSLSGNFSGYSSGGTTSTSNSFESQWSNFDSAEYKPSILQTTFPADFVFQASSTPGSQSSMNRRSSFTTGKNSAGGLLGSSSAGFLDSTTLFSKSDSMLQFERGMEEASKFLPKGNPLVIDLENGMFTRSPQSAPPRQVVVKKERDEREQFSVESKVRKNHEREDEAELQDGRSNKQSAIYREDSELSELFDKVLLCADYRKEEPTACSSNEDQPNGPEKIVQQKEETNKSSGGKSRVKKQGNKKGVVDLRTLLILCAQSVSSDDRATANELLKQISQHSSPLGDGSQRLAHCFANALEARLSGTGAQIYTALSSKRTSATDMVKAYQMFMSACPFTRLGRIFANHTILNLAKAKEVETLHIVDFGIRYGFQWPGLIYRLSKIAGGPPKLRLTGIELPQSGFRPAERVQETGRRLARYCERFNVPFDFIAIAQKWETIKIEDLKIKENELLVVNCMLRFENLLDETVVLSSPRDAVLNLIRKANPAIFIHATVNGNYNAPFFVTRFREAVFHYSTLFDVLDTNVAREDPMRLMLEREFFGREVMNIIACEGSERVERPETYKQWQVRNMRAGFRQLPLDHHLIHMLRDKLRDNYHSDFMLDVDGNYMLQGWKGRIIYAFSCWVPA* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2943 769 MobiDBLite consensus disorder prediction 270 325 - -
Dod03g2943 769 MobiDBLite consensus disorder prediction 283 325 - -
Dod03g2943 769 MobiDBLite consensus disorder prediction 44 71 - -
Dod03g2943 769 PANTHER SCARECROW-LIKE PROTEIN 14 51 768 - -
Dod03g2943 769 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 768 IPR005202 -
Dod03g2943 769 MobiDBLite consensus disorder prediction 363 378 - -
Dod03g2943 769 ProSiteProfiles GRAS family profile. 385 767 IPR005202 -
Dod03g2943 769 MobiDBLite consensus disorder prediction 49 66 - -
Dod03g2943 769 MobiDBLite consensus disorder prediction 350 387 - -
Dod03g2943 769 Pfam GRAS domain family 394 766 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2943 Dod-Chr3 61676694 61680115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2943 80 769 GRAS Transcription Factor Family AT1G07530 54.481 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g2943 GRAS 5.9e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2943 - - ahf:112736647 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2943 03 61676694 61680115 Dod03g2943 03 61676694 61680115 ECH
Dod10g1735 10 38456849 38458267 Dod03g2943 03 61676694 61680115 ECH
Dod10g1735 10 38456849 38458267 Dod03g2943 03 61676694 61680115 PCT