Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2942 ATGGTGTCACAGAAGAGATTAGACTACGTATTTATAGACTATGAGGCACCAGCCATTCCTCGAGCTACCCGATCAACTAGGAGGGCCAAATTTCAAAGAAGAGTGGAAGATGGTCAAATGGGTGCATTTGATTTATTGGCCACTGTAGCTGGTAAGTTATTTTTCCAAGATAAAGAGAATCCAACCATTCCTAGTGATACATCACCAGAAAAGGTTCAGCATGGATTTGTTAAAGAGTGCCAGGATGCAGGTAAACCACTCAAAGCTGAGTTTTCTGACAAAGGAAACTGTGACAAAAAATGTTTCCCTCATGATTCATCACAAGAAAGCAATCATAATTCCTGTAAGAAAGAATTCCCAAATCCTGAGATAGATGTCCACTCAGGCATTGCTTCTGTAGTAACAAGTTCAAGTAGTGCAGAAAGGTTTGTTGCTGAGAAATTGGTGGACGGCAAAAGCCCTAATGAAATGGCAAATTTTACAAACAAAGACATATTAGGTTCATCTGGTCATCCAGAGGTTAGTTGTTGTAAGTTAGATAGTGATACAAATGAGCTAAATCATGAGCTGCGTAATCTTGATAAGATGCCAATTGGCCCTGGGACTGAGATGTGCAGTTTTGAGGATCCAATGGCTGAAAAACCTCCTGCACTGATCAGTTTAGCTGGGAATGCGAAGCTGTGTCAGTATGATGACAGGATTCCCAGTAGCTCATTGTCCAAAGGTTGTGACAATGAGCAAGTAGTTAGTAGAGATGATGACGAAAACTATTCTGGATGTACTCACCCTAGTACCAAAACAAAGTCCTTTGGGCCATTGCCTTGTTTAGGTGATAGAAGAATACGGAAATTATTTGCTTGTAAATATCGTAAAGTTGCTCAGGAGCCAAAGGACGATGCACCTTGTAACCGTGATGGAGATTTGAAGCCAACTTACCATAGTAAGAAGAGCTGCTATAAACGCCAACCATCTCAGATTAATATTCCTTTCAAAAAGAGGAAGCCGTTTAATTGTAGTTCTGTTTCAAATTCCAATGGATTTATCAGAAGTGGTGATATGTATTATTCACCTGAGAATGGTATGAATCAAGATGCTTCTGGTCCCTCTCCTGGGAGGCATGGAGACCCTAGAATACCATCCTTGGAAGGTCAAAACTCCACATTACAATGTAGAAAAGGTGCTCATGTGAATATTAGGATCAAGTCATTTAGAGTGCCAGAGCTTTTTATTGAGATTCCAGAAACTGCGACCATTGCCTCATTGAAGAGGACAGTGATGGATGCAGTAACTGCTGTACTTGGAGATGGATTGCACGTTGGTGTCATTCGTCGAGGAAAGAAAGTTAGAGATGACAGTAAAACTCTACTTCAAACCGGAATTGCCCATGATAACCATTTGGATGCTTTGGGTTTCACCCTGGAGCCTAAAAGCCTACCACCTGTACATGCTTCACGTTCTCCAGATGTTCCCCAAGAAGACATGCCTCATCCACTATTATGGTATCCTTCCAGTCCAGCTGCAACTCATAGTTCTGACGTGTTACCTGAGAATCAAGTAACCAGTTTGGGTAACCTTGTAGTAAGTGACCATGATTCAGCACCTTCTCCTATCAATGCATCTGCCGGCAAAGGTATAATAGATTCTAAATCCCTGGTTACTGTTCCTGAAATGAGTAAGGAAGAACTAGCCGTAGTACCTGTGGCCCAGAAGTCAAAACGATCTGAGAGTTTACAGCGCCGAATTCGTAGGCCTTTTTCTGTTGATGAAGTGGAAGCATTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGCGATGTTAAACGTCGGGCTTTTGATGATTCAAACCATCGAACATATGTGGACTTGAAGGATAAATGGAAAACACTGGTGCACACGGCAAGAATATCCCCTCAGCAAAGGAGGGGAGAGCCTGTTCCTCAAGAGCTTTTGGACAGGGTCCTAACTGCACACGCATATTGGTTCCCACCAGCAGAATAA 2004 0.4247 MVSQKRLDYVFIDYEAPAIPRATRSTRRAKFQRRVEDGQMGAFDLLATVAGKLFFQDKENPTIPSDTSPEKVQHGFVKECQDAGKPLKAEFSDKGNCDKKCFPHDSSQESNHNSCKKEFPNPEIDVHSGIASVVTSSSSAERFVAEKLVDGKSPNEMANFTNKDILGSSGHPEVSCCKLDSDTNELNHELRNLDKMPIGPGTEMCSFEDPMAEKPPALISLAGNAKLCQYDDRIPSSSLSKGCDNEQVVSRDDDENYSGCTHPSTKTKSFGPLPCLGDRRIRKLFACKYRKVAQEPKDDAPCNRDGDLKPTYHSKKSCYKRQPSQINIPFKKRKPFNCSSVSNSNGFIRSGDMYYSPENGMNQDASGPSPGRHGDPRIPSLEGQNSTLQCRKGAHVNIRIKSFRVPELFIEIPETATIASLKRTVMDAVTAVLGDGLHVGVIRRGKKVRDDSKTLLQTGIAHDNHLDALGFTLEPKSLPPVHASRSPDVPQEDMPHPLLWYPSSPAATHSSDVLPENQVTSLGNLVVSDHDSAPSPINASAGKGIIDSKSLVTVPEMSKEELAVVPVAQKSKRSESLQRRIRRPFSVDEVEALVQAVEKLGTGRWRDVKRRAFDDSNHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWFPPAE* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2942 667 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 662 IPR031105 -
Dod03g2942 667 SUPERFAMILY Ubiquitin-like 394 484 IPR029071 -
Dod03g2942 667 SMART sant 581 634 IPR001005 -
Dod03g2942 667 MobiDBLite consensus disorder prediction 352 366 - -
Dod03g2942 667 Gene3D - 570 666 - -
Dod03g2942 667 ProSiteProfiles Myb-like domain profile. 577 632 IPR001005 -
Dod03g2942 667 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 577 636 IPR017930 -
Dod03g2942 667 MobiDBLite consensus disorder prediction 352 385 - -
Dod03g2942 667 SUPERFAMILY Homeodomain-like 583 663 IPR009057 -
Dod03g2942 667 Pfam Myb-like DNA-binding domain 582 631 IPR001005 -
Dod03g2942 667 CDD SANT_TRF 583 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2942 Dod-Chr3 61664712 61670264 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod03g2942 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2942 - - gmx:100797436 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2942 03 61664712 61670264 Dod03g2942 03 61664712 61670264 ECH
Dod03g2942 03 61664712 61670264 Dod08g0794 08 9467707 9472948 ECH