Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2934 ATGTGCTCTTCTTTCTGTGACCTTATAGGCAACAAGGCTCAAGGAATCAGTACTTTTTTTCTTTTTCCTGTCATGGGAGTTTGTTTGAGCAACCAAATTAAAGCTGAGATCCAATATTACGCTGGGTTAAGTTCAAAGAATGTGAGTACCAATGGAAATTATCTCAGCATCTCAGATAGTAAGGCCTCAGCGGTTTTGGTGCCTCAGACACCCCGAAGTGAGGGTGAGATCCTGCAGTCACCCAATCTGAAGAGCTTTAATTTAACAGAACTTAAGGCTGCCACCAGAAATTTTCGTCCAGACAGTGTCTTGGGAGAAGGTGGTTTTGGATCAGTTTTTAAGGGCCGGATTGATGAGCAGTCATTTGCTGCTTCCAAACCAGGCGCTGGCATTGTTGTTGCTGTTAAAAAGCTTAATCCGGATGGCTTCCAAGGTCACAAGGAGTGGTTGGCTGAGGTGAACTATCTAGGCCAGCTTTCTCATCCTCATCTGGTGAAATTGATTGGTTACTGCCTTGAAGATGATCACCGCCTTCTGGTCTATGAATTCATGCCTCGTGGCAGCTTGGAGAATCATTTGTTCAGGAGGGGCTCATATTTTCAACCTCTTTCTTGGAGCCTCCGCTTGAGGGTCGCACTTGGGGCTGCTAAAGGGCTTGCATTTCTTCACAGTGGTGAAACAAAAGTGATTTATCGGGACTTTAAGACTTCAAACGTGTTGCTGGATTCGGATTAG 735 0.4517 MCSSFCDLIGNKAQGISTFFLFPVMGVCLSNQIKAEIQYYAGLSSKNVSTNGNYLSISDSKASAVLVPQTPRSEGEILQSPNLKSFNLTELKAATRNFRPDSVLGEGGFGSVFKGRIDEQSFAASKPGAGIVVAVKKLNPDGFQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLRVALGAAKGLAFLHSGETKVIYRDFKTSNVLLDSD* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2934 244 Gene3D Transferase(Phosphotransferase) domain 1 184 244 - -
Dod03g2934 244 ProSitePatterns Protein kinases ATP-binding region signature. 104 137 IPR017441 GO:0005524
Dod03g2934 244 Gene3D Phosphorylase Kinase; domain 1 73 183 - -
Dod03g2934 244 ProSiteProfiles Protein kinase domain profile. 98 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2934 244 Pfam Protein tyrosine and serine/threonine kinase 102 243 IPR001245 GO:0004672|GO:0006468
Dod03g2934 244 PANTHER OS01G0588500 PROTEIN-RELATED 44 244 - -
Dod03g2934 244 SUPERFAMILY Protein kinase-like (PK-like) 72 244 IPR011009 -
Dod03g2934 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Dod03g2934 244 PANTHER PROTEIN KINASE APK1B, CHLOROPLASTIC 44 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2934 Dod-Chr3 61572163 61574202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2934 73 244 Glycoside Hydrolase AT3G07070 46.821 1.47e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod03g2934 PK_Tyr_Ser-Thr 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2934 - - csin:114289490 362.844