Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2931 ATGGGAAAGCACCTGCTTTCTTCCATGAATTCCACTGTTCAAGTTCAGGACAATCATCCGGGATGCATGTGGGGCATACTTCACATCCTTGATTACCATCATTGGCATAATATCAGAAACGTGTTTCCTCTCAAAAAGCATTACCGGGGAGGACATGCCAGATATAAGAGGAAAAACCTTTTGCATAGAGTCGCTGAAGCAGAACCCCTCTTGGTGAGGCAACACGGCAAAAAATGGAGTGGTACAGGCAAAAATTCTCCCAAGAGTAGCAATGAAGGATCACACACTGAAAATATGTCTAAAGGAGAGAACTCCAAAGGCTGGATCAATAAATTCCATGGTGAATCTAAGCATTTAGAGTCTTCACACCAATTTGTCCAGTGTAAAGAATGTGATACCACGGATTACTCAGGACAAAAACTGGCCACCAGTGAGGCACTTCATTTGGAGAAAGATGGCGAGATAACAGAAGCTACCCTTGAACAAAAGCTTATTGAAGCAAAGAAGCTTAAGCGAAATACTCCCATTAAATCTAAGAGGCATGGTGATGTTTTGGAGATACTTGGAGTGGAGAAGGACTTGCTCCTGAAATTTTTACTAGATATAGATGTTTGTGAGGAAAATCTTCAACTGGCTTTCAACAACAAAGCAAGATTGACAAAATCAGGGTCAGTTCCTCAACCTTCACAGATGAGAAGCATTAGTCCTATTATCTTAGAACACAAGCAAAAGGAAATTTGGCCCTTTCACAAGGGGGGAAAGTTGCTTGATGGTGCTCGAGCACAAAAGATGCTTGCATCCAGTTTTGGGAACATTTCTTATTTGAAGCCAATGGCTTTAGAGAGTGACTTCGGTGTGCGCAGTGTCATGAAACTGAAACATAAACAAAGCTCTTCTTCCTCAAGCAATCCTCAAGGTTTTAATCACAAAGGGTGGAACCAATTGGTTCTTCATCGTTTCAAAGTCATAAAACAGAAGATAAAACATGCTATTATTGAGTTAAAGAAAAGCGGTTACCAAACTTCTGTTGAAGCTATGCACCATAGAGCTTCATCCGAATACAGTATCGCCAATAATGAGAAGGAAACCTCACAAAGCTTAGATGGTGGCGCGATTCAAGAATATATAGACAACAGAAGCTCAGATGAGACCGAAGCTTCTGATTATGATTCTAGCATACATGAAGTTCGCCGCATGAAAAGAGCATCCTCTCTAAACGAGTCTCTTGATAGATACACTCAGTTGTTCGAGCAAAGTTTCAACAAAGACATCAAATGGCATAGCTCAATGTCTAAAAGCTTAAAATTGCCAAATGAAGATAAGAATAATAGCACTCCTAAGGCTTCCAGAAGGAATTTGTCTCCGCCTGATCTTGATTCTTTCAGCTTATTCATTCTGAAAGACGCACTTTCTGAAGCCAATGATATGGGGATGACAGTGGAAGAAACTGATATTCATGTTCAAAGAAAATCAGTGGGCTTTCCTTTGAATAGGGACATTTCCCTTGATCATACTGCAGAGGCTGAAATGGAGGGAACAGAAGATAGCAGTGGCAAGGAGGTGAAGCTGACTCTTTTATCTGATGAAACTCTGGAGGAAATTCAAGACAGAAAGAACTGCAACCACAGGGAGGACACACATGAGCCAGCTTTGGAAGATGGAAGTTTTCCCCAAGAACAAGTGGAATTGAGTACGGCTACCTATCCTAGCAAGGAGGCATTGGCAACTCTTGAAACTAGCTGTGAAAAAAATAAAACCACCCTCGCAGAAGGTAGGGAATTAAATGCCAGAGGCTCTAACATGGATGAATTGGAGTCTGACTTGCCAAATAAAGTAAGTGGATATTCTTGGCCTGGCTCTTTGCACAGCACTGACGCAACAGCAAGAGGCACACAAATTAGACCAGATACCGACATTGATTCCAATTTCAAATATGTGAAAGATGTTCTTGAATTTCTGGGCTTCAAGGGAAATGAGGATATTCAAATGTGGCACACAGTGGACTTCGATGGATCTTGGGGCCATGAAATTGAATTCTCTGGAGAAGAAGAGACTCTCAACACATATCATCACCACCTCCTTCTTTCCAATTTAGTTAAGGAGGTGCTCCTCCAAATACATGAGACAGCACCAACTTACTTCCCAAGGCCTTTCTCCTTCAACAGATGCCTCATCAGTTCCATGCATAATAAGGGGCACCAACACCATCTTCTTGATGAAGTATGGACTAGAGTTAACTCACACCTGAGCTTGAGGCCAGAGCTAGATCAGACATTAGATGATGTTGTGGGTCGAGATTTGGCAAAGAATAGTGGCTGGATGAACCTCCAGCATGAAGAGGAGTGTGCAGCACTTGTACTAGAGGAGATGATTGTCAAAGATTTATTAGATGAAGTTTGTTACTAA 2406 0.4169 MGKHLLSSMNSTVQVQDNHPGCMWGILHILDYHHWHNIRNVFPLKKHYRGGHARYKRKNLLHRVAEAEPLLVRQHGKKWSGTGKNSPKSSNEGSHTENMSKGENSKGWINKFHGESKHLESSHQFVQCKECDTTDYSGQKLATSEALHLEKDGEITEATLEQKLIEAKKLKRNTPIKSKRHGDVLEILGVEKDLLLKFLLDIDVCEENLQLAFNNKARLTKSGSVPQPSQMRSISPIILEHKQKEIWPFHKGGKLLDGARAQKMLASSFGNISYLKPMALESDFGVRSVMKLKHKQSSSSSSNPQGFNHKGWNQLVLHRFKVIKQKIKHAIIELKKSGYQTSVEAMHHRASSEYSIANNEKETSQSLDGGAIQEYIDNRSSDETEASDYDSSIHEVRRMKRASSLNESLDRYTQLFEQSFNKDIKWHSSMSKSLKLPNEDKNNSTPKASRRNLSPPDLDSFSLFILKDALSEANDMGMTVEETDIHVQRKSVGFPLNRDISLDHTAEAEMEGTEDSSGKEVKLTLLSDETLEEIQDRKNCNHREDTHEPALEDGSFPQEQVELSTATYPSKEALATLETSCEKNKTTLAEGRELNARGSNMDELESDLPNKVSGYSWPGSLHSTDATARGTQIRPDTDIDSNFKYVKDVLEFLGFKGNEDIQMWHTVDFDGSWGHEIEFSGEEETLNTYHHHLLLSNLVKEVLLQIHETAPTYFPRPFSFNRCLISSMHNKGHQHHLLDEVWTRVNSHLSLRPELDQTLDDVVGRDLAKNSGWMNLQHEEECAALVLEEMIVKDLLDEVCY* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2931 801 MobiDBLite consensus disorder prediction 350 370 - -
Dod03g2931 801 MobiDBLite consensus disorder prediction 431 455 - -
Dod03g2931 801 PANTHER PROTEIN TRM32 1 800 - -
Dod03g2931 801 Pfam Domain of unknown function (DUF4378) 643 798 IPR025486 -
Dod03g2931 801 MobiDBLite consensus disorder prediction 431 451 - -
Dod03g2931 801 Pfam Protein of unknown function (DUF3741) 162 200 IPR022212 -
Dod03g2931 801 MobiDBLite consensus disorder prediction 79 105 - -
Dod03g2931 801 MobiDBLite consensus disorder prediction 538 552 - -
Dod03g2931 801 MobiDBLite consensus disorder prediction 538 557 - -
Dod03g2931 801 MobiDBLite consensus disorder prediction 72 108 - -
Dod03g2931 801 PANTHER PROTEIN TRM32 1 800 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2931 Dod-Chr3 61546078 61550825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2931 157 791 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 25.859 1.46e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2931 - - gmx:100784103 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2931 03 61546078 61550825 Dod03g2931 03 61546078 61550825 ECH