Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2921 ATGGAGGGTCATGGTGGTGAGGAAGTGGATATGGGAATGGGAGGGTCAAATGGGATTCCAAGTGGGAGTTCAAGGTGGAACCCAACGAAGGAGCAGATAAGCATGCTGGAGAACCTGTACAAGCAGGGAATAAGGACCCCAACTGCTGAGGAGATACAGCAGATAACTGCTAGGCTCAGGGCGTATGGTCACATCGAAGGGAAGAATGTCTTCTACTGGTTTCAGAATCACAAGGCCAGGCAGAGGCAGAAGCAGAAGCAGGAAACCATTGCTTACTTCAATCGCTTCCTTCATAGGCCCCAGCCTCTTTTCTCCCCTCCAATTTGCCCAAACGCTGTTATCTGCGCCCCATATTGCATGCCACAGGCACAGAGTGAAATCGGTTTTTACCCTCAACATGTACATCCAAAAGTGCTTGTTCCCGTAGGTATTAGGAGGAGCCCCAATGAGAAAGTAGTTGTACCAATGGGGATGCCGCCTAGCATGTGTAACGGCCCGATGGTACATGAAGGCATGCAACAAGGAATCTCTGATTGCAACCTCATCAGCTACAGTAACCAAGAAACATTGGATCTTTTCCCTCTGCACCCAACTGGCATCTTGGAAGGAAAAGCAACAGACAACAAGGTGGTTGTGTCTTCTTTGCCTCAATCAGTTTCTGCTGATAGTTCCACTGATACTCCTTCTGCTTCTCCTGATCATATCAACCAAGAACATGGTTACCCTGCTGGAAACCAACCCTTCTTTGATTTTTTCACCTCTGGACAAGGGTCCCTTGAGAGTGGTTAA 789 0.4829 MEGHGGEEVDMGMGGSNGIPSGSSRWNPTKEQISMLENLYKQGIRTPTAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHRPQPLFSPPICPNAVICAPYCMPQAQSEIGFYPQHVHPKVLVPVGIRRSPNEKVVVPMGMPPSMCNGPMVHEGMQQGISDCNLISYSNQETLDLFPLHPTGILEGKATDNKVVVSSLPQSVSADSSTDTPSASPDHINQEHGYPAGNQPFFDFFTSGQGSLESG* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2921 262 MobiDBLite consensus disorder prediction 216 234 - -
Dod03g2921 262 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 12 255 IPR044555 GO:0003700|GO:0099402
Dod03g2921 262 Gene3D - 25 92 - -
Dod03g2921 262 SMART HOX_1 21 88 IPR001356 GO:0003677
Dod03g2921 262 CDD homeodomain 25 85 IPR001356 GO:0003677
Dod03g2921 262 MobiDBLite consensus disorder prediction 216 247 - -
Dod03g2921 262 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Dod03g2921 262 MobiDBLite consensus disorder prediction 1 28 - -
Dod03g2921 262 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 12 255 - -
Dod03g2921 262 SUPERFAMILY Homeodomain-like 16 90 IPR009057 -
Dod03g2921 262 Pfam Homeodomain 24 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2921 Dod-Chr3 61396530 61398454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2921 17 258 Wox Gene Family AT5G59340 41.985 5.34e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod03g2921 Homeodomain 5.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2921 - - gmx:100817714 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2921 03 61396530 61398454 Dod03g2921 03 61396530 61398454 ECH