Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2905 ATGCGCATAACGAGTGCAGTTACCAACGGCCTCAAGACTTCTGCCTTACCTCGATTCCTATGCACGCGTCATTCATCTACCAAATTGTTCGTCGCAGGGCTTTCCTACGATACGAACGAAACTGCTATGAGAGATGCCTTTGGGCAACATGGTGAAATCATTGAAGTTAAAGTAATATGTGATCACGTGACTGGTAAATCGAAAGGGTATGGATTCGTGCGCTTCACTACTGAAACCGCAGCTGCCACAGGGCGCAAAGAAATGCACGGCCAGGTATTTTATTTTCACTTTTTTTTTTTAATTCTTTAA 309 0.4369 MRITSAVTNGLKTSALPRFLCTRHSSTKLFVAGLSYDTNETAMRDAFGQHGEIIEVKVICDHVTGKSKGYGFVRFTTETAAATGRKEMHGQVFYFHFFFLIL* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2905 102 SMART rrm1_1 28 101 IPR000504 GO:0003723
Dod03g2905 102 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 93 IPR000504 GO:0003723
Dod03g2905 102 Gene3D - 12 96 IPR012677 -
Dod03g2905 102 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 10 93 - -
Dod03g2905 102 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 93 IPR000504 GO:0003723
Dod03g2905 102 PANTHER GLYCINE-RICH RNA-BINDING-LIKE PROTEIN-RELATED 10 93 - -
Dod03g2905 102 SUPERFAMILY RNA-binding domain, RBD 25 93 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2905 Dod-Chr3 61267948 61269422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2905 23 93 Eukaryotic Initiation Factors Gene Family AT4G34110 30.986 2.58e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2905 K13195 - gmx:100306540 140.198