Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2899 ATGTCTTTCCAAAACAAGGGATTTTGGATGGTAAAGGGTTCAGGGCATGTTAGTGACAGAGAGACAGCAGTTGATCATGCTTCCAAAATTGAACCAAAACGACCTCATCAATGGTTTGTTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAGCAAGCAGTAGAAGATGCAAATGGAAAATCGAGTTCTGGGTTTTCAAATGTCAATTTTTCTCCCTGGGAAAACAACGCCCAATTTCATTCAGTCCCAAACGTTGGTCGGCTATTTGGGTCTGAAACTAGGGCAGGTGATTTCCCAGAAAAGAATGCTTATGTTCCTGCTGATGATTCTAATGTGAGATCAAAGATGATCGCCAATCAATATGGAGACAATGCATCTTTTGGCTTGTCTATTTCTCATTCAGTTGAAGAACCTGAATCATGTCTAAATTTTGGTGGAGTGAAAAAGGTCAAAGTAAATCAGGTTAAGGATTCTGATGGTGTACGGCATCCAGAGGGACATAATTTCAATAGGCAGAGGAGCGGTGATTTACGTCAGGCCTATGGTGGGGGAGTTGAGACGAGGCCTGCATCCATAGGGCAAGCCTTTGACAAGGATGGTAATGTTGCTATAATGGGTCTCACCTACAACAGAGAGGATGCCCATGCTAGATCATTTGATGGCCCCTATGGCAAAGGAGATGACACCATCAATTCAATTGGCACTGATTCCTATAACAAAGACGACACAAATATAATTTCCTTTGTTGGGCTCCCAGATGAACAGGGTATTGTCTCTGCACCCAGGCCTGCTGCAGACTATGGTCAATTTTATAATCAATCTTCAGTTCATGTGTCAACAACAGGTCATGAGAAAGAGTTGAAGGCATCAAATTCTGATACAGCTGCAAGCACTCCCCAGTCAGCAAAAGTAAAGTCTGAAACTCTGTCCAAGAATAAACAAGAGTCCAAAGTAACCAAGAAAGAATCGCCAAACAGCTTCCCTTCCAACGTCAGGAGCTTACTTTCTACTGGTATGCTTGATGGCGTTCCTGTAAAGTATGTCTCAGTGGCCCGGGAGGAACTTCGTGGAATCATAAAAGGCTCTGGCTATCTTTGCGGGTGTCAATCATGTAACTATTCCAAGGCTCTGAATGCTTACGAGTTTGAGAGACATGCTGGTTGCAAATCAAAACATCCAAACAATCACATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAAGAGTACCCCTGAAAGTATGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCGATTAATCAGAAAGCATTTCGCTATTGGAAAGAATCATTCCAAGCAGCAACACGTGAGCTTCAGCGCATTTATGGAAAGGAAGAACTTAACCTATGA 1392 0.4188 MSFQNKGFWMVKGSGHVSDRETAVDHASKIEPKRPHQWFVDAAEVDFFPNKKQAVEDANGKSSSGFSNVNFSPWENNAQFHSVPNVGRLFGSETRAGDFPEKNAYVPADDSNVRSKMIANQYGDNASFGLSISHSVEEPESCLNFGGVKKVKVNQVKDSDGVRHPEGHNFNRQRSGDLRQAYGGGVETRPASIGQAFDKDGNVAIMGLTYNREDAHARSFDGPYGKGDDTINSIGTDSYNKDDTNIISFVGLPDEQGIVSAPRPAADYGQFYNQSSVHVSTTGHEKELKASNSDTAASTPQSAKVKSETLSKNKQESKVTKKESPNSFPSNVRSLLSTGMLDGVPVKYVSVAREELRGIIKGSGYLCGCQSCNYSKALNAYEFERHAGCKSKHPNNHIYFENGKTIYQIVQELKSTPESMLFDTIQTVFGAPINQKAFRYWKESFQAATRELQRIYGKEELNL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2899 463 MobiDBLite consensus disorder prediction 279 331 - -
Dod03g2899 463 Pfam Tify domain binding domain 358 413 IPR032308 -
Dod03g2899 463 PANTHER AUTOIMMUNE REGULATOR 1 463 - -
Dod03g2899 463 MobiDBLite consensus disorder prediction 292 308 - -
Dod03g2899 463 PANTHER DNA-BINDING PROTEIN 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2899 Dod-Chr3 61222350 61225478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2899 278 446 PHD Transcription Factor Family AT3G53680 46.893 1.44e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2899 - - gmx:100802229 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2899 03 61222350 61225478 Dod03g2899 03 61222350 61225478 ECH