Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2896 ATGATGATCACATGCAGGTGGTCAAGAATTGCTAGAAAGTTGCCAGGGCGCACAGACAATGAGATCAAGAACTATTGGAGGATTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAAGCACTCCAATAATATCATCAACATCTTCCAGTTGCTTATCCTCACTGTCCTCCTCCAACAACAACAACAACCATGCTGTGGATTCACATGCTTCAAAAAAGGCTGGAGAAGAAAGCTTTTATGACACAGGAGGGCCTACCAACAATATGACAGGTTCATCAAGTGGAACTAATAATATAGGATCACAAGATCACCAAGATGTTGAACATGGTTACTATTCTATGGATGATATATGGAAAGATATTGCTATGTCAGAAGAAGAGAACATTCTGCAAAGTGAAGAGGGTTGCAACTTTCCTTGTCCGCCAATTCCCTCTCCATCATGGGAGTATTCTTCAGAACCGCTATGGATGATGGATGAAGAAGAAAGTAAGGTGTTATTCCCTACAATTGACCAATTCTTTTCATGCTATGAACAAGGCAGTGCATTTCTAACCGGCTAA 573 0.4206 MMITCRWSRIARKLPGRTDNEIKNYWRIQMRKQKAQEKKRAPASTPIISSTSSSCLSSLSSSNNNNNHAVDSHASKKAGEESFYDTGGPTNNMTGSSSGTNNIGSQDHQDVEHGYYSMDDIWKDIAMSEEENILQSEEGCNFPCPPIPSPSWEYSSEPLWMMDEEESKVLFPTIDQFFSCYEQGSAFLTG* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2896 190 MobiDBLite consensus disorder prediction 43 72 - -
Dod03g2896 190 SUPERFAMILY Homeodomain-like 5 34 IPR009057 -
Dod03g2896 190 MobiDBLite consensus disorder prediction 85 108 - -
Dod03g2896 190 MobiDBLite consensus disorder prediction 32 108 - -
Dod03g2896 190 ProSiteProfiles Myb-like domain profile. 1 30 IPR001005 -
Dod03g2896 190 PANTHER TRANSCRIPTION FACTOR MYB48-LIKE ISOFORM X1 6 183 - -
Dod03g2896 190 Gene3D - 2 46 - -
Dod03g2896 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 34 IPR017930 -
Dod03g2896 190 Pfam Myb-like DNA-binding domain 6 27 IPR001005 -
Dod03g2896 190 CDD SANT 6 27 IPR001005 -
Dod03g2896 190 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 6 183 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2896 Dod-Chr3 61173678 61175414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2896 6 188 MYB Transcription Factor Family AT5G59780 42.328 3.75e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod03g2896 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2896 K09422 - gmx:100775900 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2896 03 61173678 61175414 Dod10g1693 10 38039060 38040752 PCT