Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2891 ATGTCTTCTTACAACCCTTTGCAATGGAAAGCAAGAGATCTTTGTTCAATGATTATAGTGTTGATTCTCTTACTTGTACTGAGTTACTACACAATATTGAAGCCTCTCTTAGCCTTACGAGGGACAAACCATGCAAGAATCTCTAGGAACCATGTTCAAAGGCGACTTCTAGATGAATCCATTCCGGATGACCATTCTTCTCAACAGCTTCAAAGCCAGGGTTTGGAGTTCTCTGTGGTGCACCCTCTTCCCATGCACCAGTTCAAGAAAAATGAGGGAGAACACAAGCCTATTAACACAGACTGTGCTATTTGTCTTGGAGAGTTTGAAGAAGGGGAGTGGCTAAACCACCTTCCTAATTGCACCCATGGTTTCCATGTTCTTTGCATTGACACATGGTTTCAATCTCATTCAAGTTGTCCGCTTTGCAGATCCTTTGTGCATCGTGATCTCCCTTCTGGCCTCGAGTTTCATGTATTTTCTGACACATTGCTAGATAATCTGAGGAGGGAAGACTCCTTCCAAGAAAGGGATGAATATTTTCAATCCATCCATGAAAATATAGCTATTAGATAA 576 0.4167 MSSYNPLQWKARDLCSMIIVLILLLVLSYYTILKPLLALRGTNHARISRNHVQRRLLDESIPDDHSSQQLQSQGLEFSVVHPLPMHQFKKNEGEHKPINTDCAICLGEFEEGEWLNHLPNCTHGFHVLCIDTWFQSHSSCPLCRSFVHRDLPSGLEFHVFSDTLLDNLRREDSFQERDEYFQSIHENIAIR* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2891 191 Pfam Ring finger domain 101 144 IPR001841 -
Dod03g2891 191 SUPERFAMILY RING/U-box 101 150 - -
Dod03g2891 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 149 IPR013083 -
Dod03g2891 191 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 148 IPR044675 -
Dod03g2891 191 CDD mRING-H2-C3H2C2D_ZSWM2 102 144 - -
Dod03g2891 191 SMART ring_2 102 143 IPR001841 -
Dod03g2891 191 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 148 - -
Dod03g2891 191 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2891 Dod-Chr3 61080560 61081135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2891 62 148 Rapid Response to Elicitors AT3G16720 49.425 3.60e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2891 - - aprc:113859782 192.971