Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2882 ATGCCTTTGTTCAAGTTTCATTCACCTTACATGCCACCATCTTCTCCTTCTTTCACTCTATCATCATCCATGTATTTAAGAGTTTTGCTGAAGCATGATGTTCTTATTCTTGTTATCACCATTGTTGCATGTGCTGCACAGTCCCTTGGTACTGGTGCTATCCTGGTAAATGCATGGAACATGACAGAGGCAGCTGCTTCTATTGGTTATGCTTTGGATATGCCAGGTGATGAGAGAGAAAAACGGCATCATGTTAACTTCAAGCATTTGACAACTCTCACATCACAAAAATGGGCTGCAACTCTTTTGAGGGGTGCTCAAGTAAGAGAACTGGAACTGAAGGAACCTTTAAAGAAGTTATCTGATGACCCCAAGACAACAATTGTTGTTCTAAGAGGGAGTGATCGAGCTGTCCTGGACAAATTCTGTTTGCCTCTTAGTAATTAG 447 0.4139 MPLFKFHSPYMPPSSPSFTLSSSMYLRVLLKHDVLILVITIVACAAQSLGTGAILVNAWNMTEAAASIGYALDMPGDEREKRHHVNFKHLTTLTSQKWAATLLRGAQVRELELKEPLKKLSDDPKTTIVVLRGSDRAVLDKFCLPLSN* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2882 148 Gene3D Glycogen Phosphorylase B; 93 103 - -
Dod03g2882 148 Gene3D Glycogen Phosphorylase B; 36 92 - -
Dod03g2882 148 Pfam Glycosyltransferase family 20 37 104 IPR001830 GO:0003824|GO:0005992
Dod03g2882 148 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 112 141 - -
Dod03g2882 148 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 43 105 - -
Dod03g2882 148 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 112 141 IPR001830 GO:0003824|GO:0005992
Dod03g2882 148 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 43 105 IPR001830 GO:0003824|GO:0005992
Dod03g2882 148 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 21 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2882 Dod-Chr3 60978946 60981746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2882 36 103 Trehalose Biosynthesis Gene Families AT1G78580 60.294 2.88e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2882 K16055 - gmx:100816642 119.398