Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2866 ATGTATACTCACAACAACAACAACACCGCAATCTCACGCGCCGCCGAGTCGCTCGGCCATTTCCCGACGGCGTCGTCTCCAATGCACTCCTCCTCCGCCGCCGATCCTCAGCACCAGCACCAACTCAGCCTGCAGGGCGAGTTCGACTCGGTGTTGCAACTCAACTCGCTGGTCACGTGCAATAATAATAACAATAACAACACCAATTATTGTAGCAGCGGGTGCAGCAGCTACACGGGGTCGCCGAGTTCGCTGGCGAGTTGCGACACTCAGCGAACCACCAATAGCCTGATGCAGAGGAGCGTTAGTAGTCACTCCCTGCTGCACAAGAATAACAATTATTATAATAATAATAATAATAGCGATTGGGCCCACCAACAGTCCCGGTTTTCTGCTCTCTTCGCTGAGATGCTTCACTCTGATAACGGTCCGGTGCGCAGGGTTTACAGTACCGGTGATCTCCAGAGGATTAATGGAATGCAACATTATCATCAGTACTCAGACAGTCCACTGTCAAGTGAGAGCAGTATGATCATAGAAGCAATGAGCAGAGCCAGTCCTTACAGCCCTGAGGAGAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGAGAAACCAGAGGAACTTCAACAAGAAGATTAAGTATGCTTGCAGGAAGACATTGGCTGACAGCAGGCCACGTATCAGAGGGAGATTTGCAAGGAATGATGAAATTGTGATGAACCCTCCGATTGAGTGGAGCCAATTTGGGGCTGGAGATGAATTAGAGGATGAGGATGATGAGAATTATTGGGCCAATTTCCTTGATTCCTTAGACCCTGCAAATCTTTCTCAGGAGCCCCAAGATAGTTCGTCTTTCGGTGTACTCTACTAG 873 0.4891 MYTHNNNNTAISRAAESLGHFPTASSPMHSSSAADPQHQHQLSLQGEFDSVLQLNSLVTCNNNNNNNTNYCSSGCSSYTGSPSSLASCDTQRTTNSLMQRSVSSHSLLHKNNNYYNNNNNSDWAHQQSRFSALFAEMLHSDNGPVRRVYSTGDLQRINGMQHYHQYSDSPLSSESSMIIEAMSRASPYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIVMNPPIEWSQFGAGDELEDEDDENYWANFLDSLDPANLSQEPQDSSSFGVLY* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2866 290 ProSiteProfiles CCT domain profile. 193 235 IPR010402 GO:0005515
Dod03g2866 290 PANTHER CCT MOTIF PROTEIN 56 290 - -
Dod03g2866 290 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 56 290 IPR045281 GO:0009909
Dod03g2866 290 MobiDBLite consensus disorder prediction 20 42 - -
Dod03g2866 290 MobiDBLite consensus disorder prediction 23 42 - -
Dod03g2866 290 Pfam CCT motif 195 235 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2866 Dod-Chr3 60756552 60759837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2866 184 234 C2C2-CO-like Transcription Factor Family AT5G24930 52.941 6.90e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod03g2866 CCT 1.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2866 - - gmx:102667610 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2866 03 60756552 60759837 Dod03g2866 03 60756552 60759837 ECH
Dod10g1673 10 37856014 37858526 Dod03g2866 03 60756552 60759837 PCT