Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2861 ATGGAGCAGTCAGATAAGTCATCAATGAGAACGACGTCGTTTCCGAGAGAGACTCGAGGCTCGCTTGAAGTGTTCAACCCTTCTTCTTCATATTCCTCCACCACCGAGAAACCGTTGAATTCACCGTTACGCTCTCAGCCATCGTGGAAATCATGGATAGAACAGCCACCACCGGAGCCAGAGCCACGCGCTTCCAAACCCGCTCCTTCCGACGACTCCACCACCACCGCCGCCGACTCGGCCGCCAATACCTCCTGGATGGCACTCAAGGACCCCAACGCTCCGACGCTGGCCGCCGTCCTCAGCGACACTCCGGCGGCAGGAGAGTCCGGCTCGGCGGCGCAGAGGGCGGCGGAGTGGGGACTGGTGCTGAAGACGGACACGGAAACCGGGAAGCCGCGGGGAGTGACGGTCCGGAACTCCGGCTGCGGCGGCTCGAGGAGGGATTCTCGGGGGTCGGCGAGGGGCTCCGGCGAGTTTCCCGACGAAGGCGGGAGGGGAGTGCCGAGGGTGTCGGAGGACCTGAGGGACGCGCTGTCGGCGTTTCAGCAGACGTTCGTGGTTTCGGATGCAACGAAACCCGATTACCCGATTCTGTATGCGAGTGCTGGCTTCTTTAAGATGACGGGTTACACTTCCAAAGAGGTCATTGGAAGGAACTGTCGGTTTTTGCAGGGAGCGGATACGGATCCGGAGGACGTGGCAAAGATAAGGGAAGCATTGCAAGCAGGGACGAGTTTCTGTGGAAGGTTGCTTAATTACAAGAAGGATGGCACTCCCTTTTGGAACCTTCTCACTATTTCGCCCATCAAGGACGACGATGGCAAAGTTCTCAAATTTATCGGGATGCAAGTGGAGGTTAGCAAGCATACGGAGGGGTCCAAGGAGAAAATGTTACGTCCGAATGGGTTGCCCGAGTCCTTGATTCGATATGATGCTCGACAGAAAGAGAAGGCAAGCAGTACAGTGACGGAGTTGGTGCAAGCCGTGAAGAGGCCCCGGGCACTCAGTGAATCAGCAAACCGTCCCTTGATCAGAAAGTCTTTAGGAAGTAGTGGCGCCGCCGCCGCCGCCGCCGCCGACAATCATGCGCATGCAGCAGCAGATCAAGCCAAAGCACCTAAGCCATCAAGGAGGAAATCGGAGAGTGTGGCTTCTTCATTTAGACGTAAATCACATTCTGCAGCAGATGACAGGAACTCTATGCAGCCAATCACTGAGCTCCCTCATCAAATGAAACACAAAAACTCATCTCGTCGCCCTTCTTTCATGGGGTTCATCAGGAAAAGTCGGTCCAGCTATGAAAGCTTCAACGATGAAGAAGCTTTTGAGGACAGCTCTGATCAGAGTGAGGATGATGAGAGGCCTGATAGTTTGGATGAAAAAACACAGCACAGGGAAAAAAGAAAGGGTCTTGATCTTGCTACCACACTTGAGCGTATTGAGAAGAACTTTGTCATTACTGATCCAAGGCTACCTGACAACCCCATAATCTTTGCATCTGATAGCTTCTTAGAGCTTACAGAGTATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCAGCAACAGTGAGAAAAATTAGAGAGGCTATTGACAGCCAAACAGAAGTTACCGTGCAGCTCATTAATTATACAAAGAGTGGCAAGAAGTTCTGGAACCTGTTTCATTTGCAACCTATGCGTGATCAAAAGGGAGAAGTACAGTACTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTGCACAACCGCATAGCAGAAGATAATGCAAAGGAGGGAGAAAAATTGATAAAACAAACTGCGGAAAATGTTGATGATGCAGTTAGAGAACTTCCAGATGCTAATTTGAAACCAGATGATCTATGGATGAATCATTCAAAAGTGGTTCTCCCAAAACCTCATAGGAAAAATGATGCTGCTTGGAGAGCTATTCAGAAGATTCTAGATAGTGGAGAACAGATAGGCTTAAAGCATTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGCAGTGTGCATCTGGTGGAGCTATGTGGAACTGGTCAATATTTTGCCATGAAGGCTATGGAGAAGGGTGTTATGCTAAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGTAATCCTTGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCCTCCTTTCAGACCAAAACACATGTTTGTTTGATAACGGATTACTGTCGTGGTGGAGAGCTATTCCTGCTTCTTGACCGGCAGCCAACAAAAGTTCTCAAGGAAGATGCAGCCAGATTTTATGCTGCTGAGGTGGTGGTTGCATTGGAGTACCTTCATTGTCAAGGGATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTTCAGAGCAACGGACATGTGTCTCTAACAGATTTTGACTTGTCCTGTTTAACTTCTTGCAAACCACAGCTTCTAGTTCCACCTACAAATGAAAAGAAGAAACATCAGAAGCAGAAAGGCCGACAAACTCCAATATTTATGGCTGAACCTATGAGAGCATCGAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTGTAACTGGTTCAGGCCACACTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGCTTTATGGGTATACACCATTCAGGGGAAAGAATAGGCAAAGAACATTTACAAATATTCTCCACAAGGATCTCAAATTTCCAAAAAATAAACAGGTTAGTATCAATGCAAAGCAGTTAATATACCGGCTGTTGCAGAGAGATCCCAAGTACAGATTAGGTTCACTGGGAGGAGCAAATGAAATTAAGCAACATCCATTCTTCCGGGGTGTCAACTGGGCCCTAGTTCGTTGCATGGATCCTCCTGAGCTTGATGCTCCCCTCTTCATGACAACTGAAGAAGGAAAACAAGAAAAAAATGTAGATTCTGGGATAGAGGAGATAAGTGTCTTCTGA 3012 0.4794 MEQSDKSSMRTTSFPRETRGSLEVFNPSSSYSSTTEKPLNSPLRSQPSWKSWIEQPPPEPEPRASKPAPSDDSTTTAADSAANTSWMALKDPNAPTLAAVLSDTPAAGESGSAAQRAAEWGLVLKTDTETGKPRGVTVRNSGCGGSRRDSRGSARGSGEFPDEGGRGVPRVSEDLRDALSAFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSFCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGSKEKMLRPNGLPESLIRYDARQKEKASSTVTELVQAVKRPRALSESANRPLIRKSLGSSGAAAAAAADNHAHAAADQAKAPKPSRRKSESVASSFRRKSHSAADDRNSMQPITELPHQMKHKNSSRRPSFMGFIRKSRSSYESFNDEEAFEDSSDQSEDDERPDSLDEKTQHREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDSQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDNAKEGEKLIKQTAENVDDAVRELPDANLKPDDLWMNHSKVVLPKPHRKNDAAWRAIQKILDSGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGQYFAMKAMEKGVMLNRNKVHRACTERVILDMLDHPFLPALYASFQTKTHVCLITDYCRGGELFLLLDRQPTKVLKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSCKPQLLVPPTNEKKKHQKQKGRQTPIFMAEPMRASNSFVGTEEYIAPEIVTGSGHTSAVDWWALGILLYEMLYGYTPFRGKNRQRTFTNILHKDLKFPKNKQVSINAKQLIYRLLQRDPKYRLGSLGGANEIKQHPFFRGVNWALVRCMDPPELDAPLFMTTEEGKQEKNVDSGIEEISVF* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2861 1003 MobiDBLite consensus disorder prediction 1 52 - -
Dod03g2861 1003 SUPERFAMILY Protein kinase-like (PK-like) 655 980 IPR011009 -
Dod03g2861 1003 ProSiteProfiles PAS repeat profile. 171 242 IPR000014 -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 1 90 - -
Dod03g2861 1003 PANTHER PHOTOTROPIN-1 121 998 - -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 439 455 - -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 356 423 - -
Dod03g2861 1003 TIGRFAM sensory_box: PAS domain S-box protein 198 291 IPR000014 -
Dod03g2861 1003 TIGRFAM sensory_box: PAS domain S-box protein 495 585 IPR000014 -
Dod03g2861 1003 ProSiteProfiles Protein kinase domain profile. 671 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2861 1003 Gene3D Phosphorylase Kinase; domain 1 670 754 - -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 68 90 - -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 125 170 - -
Dod03g2861 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Dod03g2861 1003 SMART pac_2 248 290 IPR001610 -
Dod03g2861 1003 SMART pac_2 547 589 IPR001610 -
Dod03g2861 1003 Pfam PAS domain 192 288 IPR000014 -
Dod03g2861 1003 Pfam PAS domain 493 585 IPR000014 -
Dod03g2861 1003 SMART pas_2 472 541 IPR000014 -
Dod03g2861 1003 SMART pas_2 173 242 IPR000014 -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 435 471 - -
Dod03g2861 1003 CDD PAS 198 287 IPR000014 -
Dod03g2861 1003 ProSiteProfiles PAC domain profile. 544 598 IPR000700 -
Dod03g2861 1003 PANTHER FLIPPASE KINASE 1-RELATED 121 998 - -
Dod03g2861 1003 CDD PAS 485 585 IPR000014 -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 372 397 - -
Dod03g2861 1003 SUPERFAMILY PYP-like sensor domain (PAS domain) 486 585 IPR035965 -
Dod03g2861 1003 SMART serkin_6 671 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2861 1003 SUPERFAMILY PYP-like sensor domain (PAS domain) 192 284 IPR035965 -
Dod03g2861 1003 MobiDBLite consensus disorder prediction 456 471 - -
Dod03g2861 1003 ProSitePatterns Protein kinases ATP-binding region signature. 677 700 IPR017441 GO:0005524
Dod03g2861 1003 Pfam Protein kinase domain 674 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2861 1003 ProSiteProfiles PAS repeat profile. 470 543 IPR000014 -
Dod03g2861 1003 Gene3D PAS domain 459 623 - -
Dod03g2861 1003 ProSiteProfiles PAC domain profile. 245 299 IPR000700 -
Dod03g2861 1003 Gene3D Transferase(Phosphotransferase) domain 1 755 969 - -
Dod03g2861 1003 CDD STKc_phototropin_like 669 979 - -
Dod03g2861 1003 Gene3D PAS domain 185 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2861 Dod-Chr3 60643186 60660084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2861 1 1000 AGC Kinase Gene Family AT3G45780 67.575 0.0 1340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod03g2861 Pkinase 3.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2861 K20715 - gmx:100804524 1498.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2861 03 60643186 60660084 Dod03g2861 03 60643186 60660084 ECH