Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2858 ATGAGTTGCTTTTGTTGGACAGGGAAATCAAGCGAAAAATCTGAGACCAATGACTATAGCCACACCCACAAGCCCTCCAATCTCACTTCTTCAGATAAGGTCAAAGTTGATTTAAAAGCAAATGGGAAAAAAGAAGATAGTTCAAAGAGTGATCAACTTGCTCAAGATGCGAAGAATTTGAATTTAAGTTTTAAGCAGGAGGTTTCTGAGGATGGTAACAATAATGGTAACCGGGCACAGACTTTCAGTTTTGATGAACTGGCTGCTGCAACAGGAAATTTTAGGTCGGATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTTCAAGGGGTACTTGGAGAAATTAAACCAGGTTGTAGCTATAAAACAACTCGACCCTCATGGAGTTCAAGGGATTCGGGAATTTGTTGTTGAAGTGTTGACACTGAGTATGGCCGACCACCCTAATCTGGTCAAGTTGATAGGGTTTTGTGCTGAGGGAGAGCAGAGGCTGTTGGTTTATGAATACATGCCATTGGGATCTTTGGAGAACCATTTGTTTGATCTTCCTTCTGGTAGAAAACCACTTGATTGGAATACGAGAATGCAAATAGCAGCCGGTGCAGCAAGGGGTTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTCATATATCGTGACTTGAAATGCTCTAACATTTTGTTAGGCGAGGGATATCATCCCAAGTTGTCTGATTTTGGCTTGGCAAAAGTAGGCCCGAGTGGCGATAAGACCCACGTTTCGACAAGGGTTATGGGCACATATGGGTATTGCGCCCCAGATTATGCAATGACAGGACAGTTGACATTCAAGTCAGATATTTACAGCTTCGGGGTTGTTCTTTTAGAGCTCATCACAGGCAGGAAGGCCATTGACCATACAAAACCTGCCAAAGAACAAAATCTGGTCGCTTGGGCAAGACCCTTATTCAGAGATAGGAGAAAATTCTCGCAAATGGTTGATCCATTGCTCGAAGGTCAATATCCTGTGAGAGGTTTATACCAGGCTCTTGCTATTGCTGCTATGTGTGTTCAAGAGCAGCCAAATATGCGGCCAGTTATAGTCGACGTTGTTACGGCTCTAAATTACCTTGCTACCCAGAAGTATGATCCCCAAATTCATCCTGTACAAAGCTCCAGAAGAGGTCCATCTTCTCCAAAAGCGAGAAGAGATTATGATTATGATGATGATGATGATGATGATGATGAGGGACATTATGTTGGTAATGGGAATGACTCAGAAAAATCTGTAAATTAG 1278 0.4264 MSCFCWTGKSSEKSETNDYSHTHKPSNLTSSDKVKVDLKANGKKEDSSKSDQLAQDAKNLNLSFKQEVSEDGNNNGNRAQTFSFDELAAATGNFRSDCFLGEGGFGKVFKGYLEKLNQVVAIKQLDPHGVQGIREFVVEVLTLSMADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLENHLFDLPSGRKPLDWNTRMQIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTKPAKEQNLVAWARPLFRDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLATQKYDPQIHPVQSSRRGPSSPKARRDYDYDDDDDDDDEGHYVGNGNDSEKSVN* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2858 425 MobiDBLite consensus disorder prediction 36 52 - -
Dod03g2858 425 MobiDBLite consensus disorder prediction 379 425 - -
Dod03g2858 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Dod03g2858 425 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2858 425 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2858 425 MobiDBLite consensus disorder prediction 1 53 - -
Dod03g2858 425 Pfam Protein kinase domain 99 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2858 425 Gene3D Phosphorylase Kinase; domain 1 63 170 - -
Dod03g2858 425 SUPERFAMILY Protein kinase-like (PK-like) 80 384 IPR011009 -
Dod03g2858 425 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 400 - -
Dod03g2858 425 CDD STKc_IRAK 100 369 - -
Dod03g2858 425 PANTHER OS07G0668900 PROTEIN 1 400 - -
Dod03g2858 425 Gene3D Transferase(Phosphotransferase) domain 1 171 386 - -
Dod03g2858 425 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2858 Dod-Chr3 60630322 60634228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2858 39 373 Glycoside Hydrolase AT3G07070 59.403 3.32e-145 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod03g2858 Pkinase 9.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2858 - - gmx:100804000 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1666 10 37749601 37753627 Dod03g2858 03 60630322 60634228 PCT