Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2856 ATGGAAAAGGAAAATGGGGAATGTGAATATGAGAATGAGAATGAGAATTTGAAGAATATGAAAGGGAAAGGAGGAGGAGGGATTCCGTTGCACGGAGGAAAATACGTTCGCTACAACATCCTGGGCAATTCCTTCGACGTTTATGCTAAGTACGCTCCTCCTATTCAACCCGTTGGACGCGGCGCGTACGGCATCGTTTGCTGTGCGACGAATGCGGAGACGAAAGAAGGTGTTGCGATAAAGAAGATAGGGAATGCTTTCGACAACAGGATCGATGCGAAGAGGACGCTCCGCGAAATCAAGCTGCTCTGTCACATGGAACATGATAATGTGATTAAGATTAAGGACATTATAAGGCCACCGGAGAGGGAGAAGTTCAATGATGTGTATATTGTGTATGAGTTGATGGACACTGACCTTCACCAGATTATACACTCCAACCAGCCTCTTACTGATGAGCACTGCCAGTATTTCCTATATCAACTCTTGAGAGGATTGAAGTACATACACTCTGCCAATGTTTTGCACCGAGATCTAAAGCCAAGCAATTTACTTCTCAATGCAAATTGTGATCTCAAAATATGTGATTTTGGGCTTGCCAGAACAACATCCGAGACAGACTTTATGACAGAATATGTTGTGACTCGTTGGTATAGAGCCCCCGAATTACTATTGAATTGTTCAGAATATACTGCAGCTATTGATATATGGTCAGTTGGCTGCATTTTGATGGAGATAATTAGAAGGGAGGCTTTATTTCCTGGTAAAGACTATGTTCAACAGTTGGCACTTATAACCGAGTTGCTGGGTTCACCAAATGACTCAGATCTTGGATTCCTCAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCACACATGTAGAAAAGCAGCCCTTTGCTCAAAAGTTTCCTGATGTGTCCCCGTTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTTGATCCTTCCAAACGCATAACTGTTGAGGAGGCACTGAATCACCCATATTTGTCTAGCCTTCATGAGATCAACGAGGAGCCCACTTGCCCAAGTCCTTTCGTCTTTGATTTCGAACAGACAACTCTCAGCGAAGAGGACATAAAAGAGCTCATATGGAGGGAGTCTCTGACCTTCAGCCAGCATCAGATGCTGGAATAG 1161 0.4332 MEKENGECEYENENENLKNMKGKGGGGIPLHGGKYVRYNILGNSFDVYAKYAPPIQPVGRGAYGIVCCATNAETKEGVAIKKIGNAFDNRIDAKRTLREIKLLCHMEHDNVIKIKDIIRPPEREKFNDVYIVYELMDTDLHQIIHSNQPLTDEHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREALFPGKDYVQQLALITELLGSPNDSDLGFLRSDNAKKYVKQLTHVEKQPFAQKFPDVSPLAIDLAEKMLVFDPSKRITVEEALNHPYLSSLHEINEEPTCPSPFVFDFEQTTLSEEDIKELIWRESLTFSQHQMLE* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2856 386 ProSitePatterns MAP kinase signature. 87 190 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dod03g2856 386 SMART serkin_6 52 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2856 386 CDD STKc_TEY_MAPK 45 380 - -
Dod03g2856 386 Pfam Protein kinase domain 56 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2856 386 Gene3D Phosphorylase Kinase; domain 1 35 375 - -
Dod03g2856 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 29 383 - -
Dod03g2856 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 29 383 - -
Dod03g2856 386 ProSitePatterns Protein kinases ATP-binding region signature. 58 82 IPR017441 GO:0005524
Dod03g2856 386 Coils Coil 3 23 - -
Dod03g2856 386 ProSiteProfiles Protein kinase domain profile. 52 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2856 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Dod03g2856 386 Gene3D Transferase(Phosphotransferase) domain 1 136 365 - -
Dod03g2856 386 SUPERFAMILY Protein kinase-like (PK-like) 55 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2856 Dod-Chr3 60572635 60576904 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2856 20 379 MAP Kinase Gene Family AT1G07880 79.722 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dod03g2856 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2856 K04371 - gmx:100802929 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2856 03 60572635 60576904 Dod03g2856 03 60572635 60576904 ECH