Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g2848 | ATGGCCGGCGTTAACCCGAACGGTGCGGCGGATTTTCCGGCGGTCCCGACGCACGGTGGACAGTTCATTCAGTACAACATCTTCGGTAACCTCTTCGAGGTCACAGCGAAGTACCGCCCTCCGATCATGCCTATCGGTCGTGGAGCTTATGGAATCGTTTGCTCGCTGTTGAATACGGAGACTAATGAGCTGGTGGCTATTAAGAAGATAGCGAACGCGTTCGACAATCACATGGACGCGAAGCGTACTCTGCGTGAGATTAAGCTTCTTAGGCACTTGGATCATGAAAACGTAATTGGTTTAAGAGATGTTATTCCTCCACCCTTGCGTAGAGAGTTCAATGATGTCTACATTGCCATGGAACTCATGGATACCGATCTTCATCACATCATTCGCTCCAATCAGAATCTGTCAGAGGAACACTGCCAGTACTTCTTGTATCAGATTCTTCGTGGTCTGAAGTACATACATTCTGCAAACATAATCCACAGAGATTTGAAACCAAGCAACCTGTTGCTGAATGCAAATTGTGACTTGAAGATTATAGATTTTGGTCTTGCAAGGCCAACTTTAGAAAGTGACTTCATGACTGAGTATGTTGTCACAAGATGGTATAGGGCTCCTGAACTGCTGTTGAACTCTTCAGATTACACATCTGCGATAGATGTGTGGTCTGTTGGTTGCATCTTTATGGAACTCATGAATAAAAAGCCTCTATTTCCAGGCAAAGATCACGTCCACCAGATGCGCTTATTGACAGAGCTTCTTGGCACTCCAACTGAGGCTGACCTTGGGTTAGTGAAAAATGAGGATGCAAGAAGATATATCCGACAACTTCCTCAATATCCTCGCCAACCTTTAGCTCAGGTCTTCCCCCATGTTCACCCCTTAGCAATGGATCTCGTTGATAAAATGTTGACAGTTGATCCCACAAAAAGAATTACAGTTGAAGAAGCACTAGCCCATCCATACCTTGAAAAGCTGCATGATGTAGCTGATGAGCCAGTCTGCATGGAGCCATTCTCATTTGATTTTGAGCACCAGCAAATGGATGAAGAGCAAATAAAAGAGATGATCTACAGGGAGGCATTGGCACTCAATCCTGAGCATGCTTTAACGCATTTACATGAGCAATCTGAAGTTTAG | 1146 | 0.4485 | MAGVNPNGAADFPAVPTHGGQFIQYNIFGNLFEVTAKYRPPIMPIGRGAYGIVCSLLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGLRDVIPPPLRREFNDVYIAMELMDTDLHHIIRSNQNLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPTLESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTEADLGLVKNEDARRYIRQLPQYPRQPLAQVFPHVHPLAMDLVDKMLTVDPTKRITVEEALAHPYLEKLHDVADEPVCMEPFSFDFEHQQMDEEQIKEMIYREALALNPEHALTHLHEQSEV* | 382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g2848 | 381 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 15 | 370 | - | - | |
Dod03g2848 | 381 | ProSitePatterns | Protein kinases ATP-binding region signature. | 45 | 69 | IPR017441 | GO:0005524 | |
Dod03g2848 | 381 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 161 | 173 | IPR008271 | GO:0004672|GO:0006468 | |
Dod03g2848 | 381 | Pfam | Protein kinase domain | 44 | 325 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g2848 | 381 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 333 | IPR011009 | - | |
Dod03g2848 | 381 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 15 | 370 | - | - | |
Dod03g2848 | 381 | ProSitePatterns | MAP kinase signature. | 74 | 177 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Dod03g2848 | 381 | SMART | serkin_6 | 39 | 325 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g2848 | 381 | Gene3D | Phosphorylase Kinase; domain 1 | 22 | 362 | - | - | |
Dod03g2848 | 381 | Gene3D | Transferase(Phosphotransferase) domain 1 | 123 | 352 | - | - | |
Dod03g2848 | 381 | ProSiteProfiles | Protein kinase domain profile. | 39 | 325 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g2848 | 381 | CDD | STKc_TEY_MAPK | 32 | 368 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g2848 | Dod-Chr3 | 60377627 | 60381333 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g2848 | 4 | 371 | MAP Kinase Gene Family | AT3G45640 | 81.622 | 0.0 | 649 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_MAPK | Dod03g2848 | Pkinase | 7.8e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g2848 | K20536 | - | gmx:100801339 | 739.954 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod03g2848 | 03 | 60377627 | 60381333 | Dod03g2848 | 03 | 60377627 | 60381333 | ECH |