Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2846 ATGGATCTGATGCGCTCCGAGAAAATGTCGCTCGTCCAACTCATCATCCCCGTCGAGTCCGCTCACCGAGCCATCACCTATTTGGGCGAACTCGGCCTCCTCCAATTCCGAGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAATGTTTGTTAACCAGGTAAAGAGATGTGTTGAGATGTCAAGAAAGCTACGATTCTTCAAAGATCAAATCAATAAAGGTGGTCTAGTATCTTCTCATCCTGTCTTGCAGCCAGATATTTACTTGGAGGATTTAGAGATACAACTTGCTGACCATGAACATGAGCTAATTGAAGTGAACTCTAATAGTGAGAAACTTCGGCAATCTTACAATGAACTCTTGGAGTTCAAGATTGTATTGCAAAAGGCACGTGATTTTCTAGTTTCAAATCATGGACATGCTGTTTCAGAAGAGAGAGAACTGAAGGAGAATGTTTACTCAAATGGAGACTATATTGAGACACCATTTTTGTTTGAACAGGAACCAAGGATGGAACCATCAAATCAATCTGGTTTAAGATTTATTAGTGGGATAATTTGTAAATCCAAAGTTCTTAGGTTTGAACGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGTTGATGACCAAATCATGGATCCTATTTCAAATGAGACGGTTGAGAAAACAGTGTTCGTTGTGTTTTTCTCTGGGGAGCAAGCAAGGAAAAAGATTCTAAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAGCAGACGCAAATAACTAGGGAGGTTTCGTCACGTCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATGAGGCATCAGAATAAGGCTCTGGCTTCTGTAGGAGGTCAATTGGAAAAATGGATGGAGATGGTAAGAAGAGAGAAGGCCGTGCATGATACGCTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGCTGGTGTCCTATATTTGCAAAAGCACAGATTCAGGAGGCACTACAACGTGCAACTTTGGACAGCAACTCACAAGTTGGCATAATCTTTCATTCAATGGATGTGCTGGAATCACCACCTACATATTTTAGGACCAACGGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTACACAACTGTTATATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTTGGAGCATTAGTCCTTATAGCACGTGAAAGAAAGCTCGGCACTCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTCCTTTTGATGTCACTTTTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATATTTGGTTCATCAGCTTACAAGTGCCGAGATAGCTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATATCGAGAACCATACCCATTTGGAGTGGATCCCAGCTGGCGTGGAAGTCGTTCGGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCCATTCTGCTTGGTGTGGTGCATATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGCAACTCAATAGATATAAGGTACCAGTTTGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGCTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGTTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCCTTTGACAATCTAGGTGAGAATGAATTGTTCTGGGGCCAACGGGCACTTCAAGTTGTGTTATTGCTTTTGGCCGTAATTGCAGTTCCCTGGATGCTCTTCCCAAAACCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGGCAAACTTATGGCATCCTTTCTAACACTGAGATGGATCCTGAGATGGAACCAGATTCAGCCAGGCAACATCATGAGGAGTTCAATTTCAGTGAGGTCTTTGTCCGCCAAATGATTCACGCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACGGCATCTTATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCGGAACTTTCTACTGTCTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGAAAATCTTGTCATTCGGTTAGTGGGGTTAGCTGTTTTTGCCTTCGCAACTGCCTTTATACTACTAATGATGGAGACTCTCAGTGCTTTTCTTCACGCCTTGCGTCTTCATTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTATAAGTTCAGACCCTTTTCCTTTGCCTCCTTAACAGAGGATGAAAATTGA 2427 0.4137 MDLMRSEKMSLVQLIIPVESAHRAITYLGELGLLQFRDLNAEKSPFQRMFVNQVKRCVEMSRKLRFFKDQINKGGLVSSHPVLQPDIYLEDLEIQLADHEHELIEVNSNSEKLRQSYNELLEFKIVLQKARDFLVSNHGHAVSEERELKENVYSNGDYIETPFLFEQEPRMEPSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPVDDQIMDPISNETVEKTVFVVFFSGEQARKKILKICEAFGANCYPVPEDISKQTQITREVSSRLADLEATLDAGMRHQNKALASVGGQLEKWMEMVRREKAVHDTLNMLNFDVTKKCLVGEGWCPIFAKAQIQEALQRATLDSNSQVGIIFHSMDVLESPPTYFRTNGFTSPYQEIVDAYGVARYQEANPAVYTTVIFPFLFAVMFGDWGHGICLLLGALVLIARERKLGTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGSSAYKCRDSSCRDAHTIGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVVHMNLGIILSYFNARFFGNSIDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFDNLGENELFWGQRALQVVLLLLAVIAVPWMLFPKPFILKKLHNERFQGQTYGILSNTEMDPEMEPDSARQHHEEFNFSEVFVRQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYENLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDEN* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2846 808 PIRSF ATP6V0A1 1 808 IPR026028 GO:0000220|GO:0046961
Dod03g2846 808 PANTHER VACUOLAR PROTON ATPASE A1 1 807 - -
Dod03g2846 808 Pfam V-type ATPase 116kDa subunit family 27 800 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dod03g2846 808 Coils Coil 89 116 - -
Dod03g2846 808 PANTHER VACUOLAR PROTON ATPASES 1 807 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2846 Dod-Chr3 60352041 60366444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2846 1 801 Primary Pumps ATPases(2) AT2G28520 79.627 0.0 1312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2846 K02154 - gmx:100800799 1477.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1650 10 37491751 37501583 Dod03g2846 03 60352041 60366444 PCT