Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2838 ATGGAGGGAAGTGACAATACAAACAACTCCATTTGCTCTGCCCCAGTTTCTCATCAATCTCCTACTTCCTCTTTATCTTCCCCTCCACCCCCTCCTGCTCCAGCTGCTGCAGCAGCAGCTCCCCATGTTGTGATGAGCCCTTGTGCTGCTTGCAAGATCTTGAGGCGAAGATGTGCTGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTGAGCCTACAAAGTTTACCATTGCTCACAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTACAGGAACTTCCTGAGTCTCAAAGAGCTGATGCAGTGACTAGCATGGTATACGAGGCTAGTGCAAGGCTAAGAGACCCAGTTTATGGTTGTGCAGGCGCAATTTGCCAGCTCCAAAAGCAGGTCAATGAGCTTCAAGCACAATTAGCCAAGGCACAAGGTGAGCTTGTAACCATGCAACTCCAGCAAGCCAACCTTGTAGCTCTACTTTGTATGGACATGACACAAAGCCCACAGGAACATTCACCACACCAATCAATGGACAATTTCATTAATTCTAGCCCTCCCCACAGCGGCAGTATGAACTTCTTTGAGGAGAACAGTAGCCTCAACTCATCATGGGAGCCACTTTGGATATGA 633 0.4818 MEGSDNTNNSICSAPVSHQSPTSSLSSPPPPPAPAAAAAAPHVVMSPCAACKILRRRCAEKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARLRDPVYGCAGAICQLQKQVNELQAQLAKAQGELVTMQLQQANLVALLCMDMTQSPQEHSPHQSMDNFINSSPPHSGSMNFFEENSSLNSSWEPLWI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2838 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 38 207 - -
Dod03g2838 210 MobiDBLite consensus disorder prediction 1 37 - -
Dod03g2838 210 Pfam Lateral organ boundaries (LOB) domain 47 144 IPR004883 -
Dod03g2838 210 ProSiteProfiles LOB domain profile. 46 147 IPR004883 -
Dod03g2838 210 Coils Coil 126 153 - -
Dod03g2838 210 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g2838 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2838 Dod-Chr3 60260789 60263091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2838 42 209 AS2 family AT1G07900 65.497 2.43e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod03g2838 LOB 2.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2838 - - ccaj:109798760 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2838 03 60260789 60263091 Dod03g2838 03 60260789 60263091 ECH
Dod10g1644 10 37408953 37411469 Dod03g2838 03 60260789 60263091 ECH
Dod10g1644 10 37408953 37411469 Dod03g2838 03 60260789 60263091 PCT