Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2836 ATGAAACAACATGTGGAGGTGAAGTTGCTTCATGGGATGGTGCCAAAATGCCCTCATGAAGGATGCAATTCTGAGCTTCTTGTTGACAGCTGCAAGAAATTCTTGACAAATAAATTCATTGAGACCATGCAGCTACGAAAATTGGAAGCTTCAATTCCTGTTACTGAGAAAGTTTATTGTCCTTATCCAAGATGCTCTGCATTAATGTCAAAAACTGAACTTTTAGAGTACTCCAAAAATCTTATTGGTGATTCTGAACTGACAGGACCCAAGAAATGCATAAAATGTCATGGTCTCTTCTGTTTCAGTTGTAAGGTTCCTTGGCATAGTGGTATGACATGCCACACTTACAAAAGGTTGAATCCTAACCCTCCTGCTGAAGATTTGAAGCTGAAGTTTCTGGCATCAAGGAGTCTATGGCGACAGTGCGTGAAGTGTAACCATATGATTGAACTTGCTGAAGGCTGCTATCACATGACTTGCAGATGTGGGTTCGAATTTTGCTATAACTGTGGAGCTGAGTGGAAGAACAAAAAGGCAACATGTGCTTGCCCACTCTGGGCCGAGGACAATATTTGGTTTGAGGATCATGACAGGGACTGGGATGAAGAAGAGGAAGATGAAGATGAAGATGAGGATGATGATTATTATGACTCTGATTATTCAGATGGTTTTGACTGA 681 0.4112 MKQHVEVKLLHGMVPKCPHEGCNSELLVDSCKKFLTNKFIETMQLRKLEASIPVTEKVYCPYPRCSALMSKTELLEYSKNLIGDSELTGPKKCIKCHGLFCFSCKVPWHSGMTCHTYKRLNPNPPAEDLKLKFLASRSLWRQCVKCNHMIELAEGCYHMTCRCGFEFCYNCGAEWKNKKATCACPLWAEDNIWFEDHDRDWDEEEEDEDEDEDDDYYDSDYSDGFD* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2836 226 Gene3D - 111 222 - -
Dod03g2836 226 ProSiteProfiles TRIAD supradomain profile. 1 194 IPR044066 -
Dod03g2836 226 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 1 195 IPR031127 GO:0004842|GO:0016567
Dod03g2836 226 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 1 195 - -
Dod03g2836 226 SMART ibrneu5 41 114 IPR002867 -
Dod03g2836 226 SMART ibrneu5 115 182 IPR002867 -
Dod03g2836 226 SUPERFAMILY RING/U-box 55 119 - -
Dod03g2836 226 MobiDBLite consensus disorder prediction 197 226 - -
Dod03g2836 226 Pfam IBR domain, a half RING-finger domain 45 114 IPR002867 -
Dod03g2836 226 Pfam IBR domain, a half RING-finger domain 133 182 IPR002867 -
Dod03g2836 226 SUPERFAMILY RING/U-box 128 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2836 Dod-Chr3 60210846 60212255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2836 8 173 C3H Transcription Factor Family AT2G19610 36.905 2.79e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2836 - - ahf:112736554 408.297