Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2819 ATGATGTCTGACGAAGCCTTTTCTGTTCCTTCCAACCCCATCGTCAGAACCAACTTGGTTCATGTCCAAGACCCAAGCTCAAATCCTAATCATCCTAACCCTAATTCAAACTCAGCTAAGAAGAAGAGAAATCTACCCGGAACACCAGATCCAGATGCAGAAGTGATAGCTCTGTCACCCAAGTCTCTGATGGCCACAAACCGTTTCGTTTGCGAAATCTGCAAGAAGGGTTTCCAGAGGGATCAGAACTTGCAGCTCCATAGGCGAGGGCACAACCTTCCGTGGAAGCTGAAGCAGAGAAGCAACAAGGAGCAAGTGAGGAAGAAGGTGTACGTGTGCCCTGAGAAGAGCTGCGTGCACCACGACCCTTGTAGAGCACTTGGTGACCTGACAGGTATAAAGAAGCACTACAGCAGAAAGCATGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAATACGCAGTTCATTCCGATTGGAAGGCCCACAGCAAGATTTGTGGGACTAGGGAGTACAAATGTGACTGTGGCACCGTTTTCTCCAGGAAGGACAGCTTTATAACACATAGAGCCTTTTGTGACGCTTTGGCTGAAGAAAGTGCAAGGATGACTACAGTTCCAGCAGCTTTAAGTAACTTTAGAAGGGATCATCATTTGACCAATGCTCAAGCGCAAAGAATGCCTCACGTTCTTCCTGGGTTTCATTCAGATCAATTTGGTGGTTCTTCAGGGTCAGAAACATTGGGGAACTATGCTGATTCCGACCATGGTCACAACAAGATGATGAGGCTTCCAATATGGCTAGACCACCAGGCCAATTCTCAGCTTCATAATAATCCCCTTAGCTTCTCAAACAAATCAAGTGGTTTCTCATTAGGAGCAAACTCTGCATGCACCATGCCTGATTTAGTGCAAACAATGAACATGTTTGGGTCACCCCAACAGCAAGCACAGTGGCAGCTGAACTACAAGTCATCATACCCAGCAGCGTCATTCACTAGTGCCAATAACATGCCTATGCTACCACCATCACCACCACATCATCATGGAATGAAGCAAGAACAAGAAGAGACCAAAGGAGACTTCTTGTCACATAGCCCAAGCTCTTTGTTTTTCGGTACTCACAGCAATACACAAGGAGGCCAAAACATTAGTACTCACATGTCAGCAACCGCACTGTTGCAAAAAGCAGCCCAAATAGGATCTACGAGGATTAATGATATCGATAACAACGCAGCCTTCAACAGCAATCATAGCGCTTTTGGCTTGGTAGGGGTGGGCTCAAATCTCTCAAACATCTCCAACACAAGGAATAATAACAACAACAACATTACCATTGGTGAGTTGATGAGTTTGGAAGCCAGCAATAACAACAACATTGGAGGAGGGTTAATTCCATTGAATGACTCGAAGTTCTCAAACTCATCAAACTTTGTGACTGTGAATAACACCAGTAATAAGAATTTGGATCAGGCAGCATCAATTATGGACAACAAGCAACTGCATCATTCAAGGTCAAAGGATAAAGATGGTTTGGGTTTGACGAGGGACTTCCTTGGCGTTGGAGATGAGTCAATGAGCAGGCCATTCTTGCAGCAGGAGCTCGCTGAGTTTGGTGCAATAGGCTCCGCCATGGACCTGCAGAGCCAGCAGTATAGTGGACATTACTGCTAG 1677 0.458 MMSDEAFSVPSNPIVRTNLVHVQDPSSNPNHPNPNSNSAKKKRNLPGTPDPDAEVIALSPKSLMATNRFVCEICKKGFQRDQNLQLHRRGHNLPWKLKQRSNKEQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTVFSRKDSFITHRAFCDALAEESARMTTVPAALSNFRRDHHLTNAQAQRMPHVLPGFHSDQFGGSSGSETLGNYADSDHGHNKMMRLPIWLDHQANSQLHNNPLSFSNKSSGFSLGANSACTMPDLVQTMNMFGSPQQQAQWQLNYKSSYPAASFTSANNMPMLPPSPPHHHGMKQEQEETKGDFLSHSPSSLFFGTHSNTQGGQNISTHMSATALLQKAAQIGSTRINDIDNNAAFNSNHSAFGLVGVGSNLSNISNTRNNNNNNITIGELMSLEASNNNNIGGGLIPLNDSKFSNSSNFVTVNNTSNKNLDQAASIMDNKQLHHSRSKDKDGLGLTRDFLGVGDESMSRPFLQQELAEFGAIGSAMDLQSQQYSGHYC* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2819 558 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Dod03g2819 558 Gene3D Classic Zinc Finger 48 121 - -
Dod03g2819 558 MobiDBLite consensus disorder prediction 335 356 - -
Dod03g2819 558 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 91 IPR013087 -
Dod03g2819 558 SMART c2h2final6 69 91 IPR013087 -
Dod03g2819 558 SMART c2h2final6 146 166 IPR013087 -
Dod03g2819 558 SMART c2h2final6 111 141 IPR013087 -
Dod03g2819 558 Gene3D Classic Zinc Finger 124 204 - -
Dod03g2819 558 SUPERFAMILY beta-beta-alpha zinc fingers 68 166 IPR036236 -
Dod03g2819 558 MobiDBLite consensus disorder prediction 21 52 - -
Dod03g2819 558 PANTHER ZINC FINGER PROTEIN JACKDAW 20 543 IPR033243 GO:0003700
Dod03g2819 558 MobiDBLite consensus disorder prediction 21 43 - -
Dod03g2819 558 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2819 Dod-Chr3 60052873 60055859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2819 39 210 IDZ Gene Family AT3G45260 87.209 8.77e-114 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod03g2819 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2819 K25870 - gmx:100781896 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2819 03 60052873 60055859 Dod03g2819 03 60052873 60055859 ECH
Dod10g1635 10 37275181 37278477 Dod03g2819 03 60052873 60055859 PCT