Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2810 ATGGGCTGCTGTAATTGCTTCGGGTTCATCAGGAGACCAAGAGCCAGACCGGCACGCCAGACGGCTAAGCCCTGTGAGATCAACAATAATAATCTCTCTCAGGAATTGTTGTTGGATGATGACATTGATGACGATGAGCAGTCTTATAACGACGAGGTTACTAACACCACTAGCGGAGATGATAGTGAGGTGCAAGCTCGCCCCAAGCGGTCTGAGGAAATTTTGAACTTTAGGGCAGAGAATGACTTGATTTGTAGAAAGTTTCCTGTTAAGGAGACTCACAAAGTTGTTCGAGCAGAGGATGAAAATGGTAACAAGATGGTAAATGAGTATGTTCGCGAGTGTAAGATTGGTTCTGGTAGCTATGGGAAAGTGGCTCTTTATCAAAGCTCTGTTGATGGAAAGCATTATGCAATTAAGTCATTTCATAAGTCTCATTTACTGAAGCTTCGAGTTGCACCTTCTGAAACAGCCATGACTGATGTTCTTCGTGAGGTACAAATTATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATCGAGGTGATTGATGACCCAGAGTCAGATCACTTCTACATGGTACTTGAATATGTAGAAGACAAATGGGTTTGTGAAGGTACTGGTCGTTCTTGTGCCCTAGGTGAAGGGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTATCATATCTCCATGCCCACAACATAGTACATGGAGATATTAAACCTGATAATCTGCTGATTACTCGTCATGGTACAGTAAAAATAGGGGATTTCAGTGTCAGCCAGGCTGTTGAGGACGGTAATGACGAGCTTCGCCGATCACCTGGCACTCCGGTTTTCACTGCTCCAGAATGCATCTTAGGTCTTACCTATCATGGTAAAGCTGCAGACACATGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCCTTTCTTGGAGACACACTCCAAGACACATACGACAAAATAGTCAATAATCTGTTAATACTCCCGAATGATTTGAACCCCCAGTTAAAGAACTTAGTAGAAGGACTACTTATCAAAGACCCAAGACTAAGGATGACATTAAGTGATGTTGCGGTGCACCGCTGGGTTATCGGAGATGATGGGCCAATTCCCGAGTACCTGTGTTGGTGCAGAAGGAAGCGCATGGAGGAGAGGGGAGAAGACAATGAGAGCAACATGCTTGATTGA 1215 0.437 MGCCNCFGFIRRPRARPARQTAKPCEINNNNLSQELLLDDDIDDDEQSYNDEVTNTTSGDDSEVQARPKRSEEILNFRAENDLICRKFPVKETHKVVRAEDENGNKMVNEYVRECKIGSGSYGKVALYQSSVDGKHYAIKSFHKSHLLKLRVAPSETAMTDVLREVQIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEDKWVCEGTGRSCALGEGTARRYLRDIVSGLSYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAVEDGNDELRRSPGTPVFTAPECILGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNLLILPNDLNPQLKNLVEGLLIKDPRLRMTLSDVAVHRWVIGDDGPIPEYLCWCRRKRMEERGEDNESNMLD* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2810 404 SMART serkin_6 111 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2810 404 CDD STKc_LKB1_CaMKK 117 372 - -
Dod03g2810 404 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Dod03g2810 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Dod03g2810 404 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 401 - -
Dod03g2810 404 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 401 - -
Dod03g2810 404 Gene3D Phosphorylase Kinase; domain 1 105 207 - -
Dod03g2810 404 Pfam Protein kinase domain 111 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2810 404 MobiDBLite consensus disorder prediction 45 68 - -
Dod03g2810 404 ProSiteProfiles Protein kinase domain profile. 111 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2810 404 SUPERFAMILY Protein kinase-like (PK-like) 104 385 IPR011009 -
Dod03g2810 404 Gene3D Transferase(Phosphotransferase) domain 1 209 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2810 Dod-Chr3 59946176 59950303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2810 106 379 CBL-interacting serine-threonine protein kinases AT5G35410 32.117 6.03e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Dod03g2810 Pkinase 2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2810 K00908 - gmx:100776013 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2810 03 59946176 59950303 Dod03g2810 03 59946176 59950303 ECH