Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2799 ATGGCTAAAGATGTTGAGGTTCAAGAGCAAGGAGAGTACTCAGCAAAAGACTACCATGACCCTCCTCCAGCACCCTTGATTGATGCAGAGGAGCTTACAAAGTGGTCCTTCTATAGAGCCCTCATAGCTGAGTTCATAGCAACACTTCTTTTCCTTTACATCACGGTGTTGACCATCATTGGCTACAAGAGTCAGACTGATACAGCCAAGGGTGGCACTGAGTGTGATGGTGTTGGCATTTTGGGTATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACAGCCGGTATTTCTGGAGGACACATAAACCCGGCTGTGACATTTGGGCTGTTCCTGGGAAGGAAGGTGTCACTGATAAGGGCAGTCCTTTACATGGCAGCACAGTGTGCTGGTGCAATCTGTGGTGCTGGACTGGCCAAGGGCTTCCAGAAGGCATACTTTGACAGGTATGGAGGTGGTGCCAACTTTGTCCAGGATGGATACAACAAAGGCACAGCTTTGGGAGCTGAGATCATTGGCACCTTCGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCTAAGAGGAACGCTAGGGACTCCCATGTTCCTGTTTTGGCACCACTCCCAATTGGATTTGCTGTTTTCATGGTTCACTTGGCCACAATCCCAGTTACCGGTACTGGCATCAACCCAGCAAGAAGCTTCGGATCTGCTGTAATTTACGACAAAGACAAAATCTGGGATGACCATTGGATTTTCTGGGTTGGACCAATGATTGGAGCTGCAGCAGCTGCAATCTACCACCATTACATTCTTAGAGCAGCAGCCATCAAGGCCCTTGGATCCTTCAGGAGCAACAACTAA 858 0.4872 MAKDVEVQEQGEYSAKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYITVLTIIGYKSQTDTAKGGTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRAVLYMAAQCAGAICGAGLAKGFQKAYFDRYGGGANFVQDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGSAVIYDKDKIWDDHWIFWVGPMIGAAAAAIYHHYILRAAAIKALGSFRSNN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2799 285 PANTHER AQUAPORIN PIP2-7 1 284 - -
Dod03g2799 285 SUPERFAMILY Aquaporin-like 31 271 IPR023271 -
Dod03g2799 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Dod03g2799 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 CDD MIP 39 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 TIGRFAM MIP: MIP family channel proteins 43 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g2799 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Dod03g2799 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 284 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2799 Dod-Chr3 59848061 59850373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2799 1 283 Major Intrinsic Protein MIP AT5G60660 79.152 7.81e-171 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2799 K09872 - gmx:100811119 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2799 03 59848061 59850373 Dod03g2799 03 59848061 59850373 ECH
Dod10g1616 10 37109540 37111754 Dod03g2799 03 59848061 59850373 ECH