Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2792 ATGGCGATGGCTGTGGCTCAACATAGAGAAAGTAGCAGCAGCGGTAGCATTGAGAAGCACCACCTTGATTCTGGGAAATATGTGAGGTACACTGCTGAACAAGTTGAAGCTCTTGAAAGGGTCTATTCTGAGTGCCCCAAACCAAGTTCCCTTAAGAGGCAGCAACTGATCCGGGAGTGCCCCATTCTTTCCAACATTGAGCCTAAGCAAATTAAGGTTTGGTTCCAGAATCGAAGATGTAGGGAGAAGCAGAGAAAAGAGGCTTCACGGCTTCAGACTGTGAACCGGAAACTGTCAGCAATGAACAAGCTGTTGATGGAGGAGAATGATCGGTTGCAGAAACAGGTGTCACATCTTGTGTGCGAGAATGGTTATATGAGGCAGCAATTGCAAACTACATCAGCAGCAACTACTGATGCTAGTTGTGATTCAGTAGTTACTACTCCTCAAAATTCTATGAGAGATGCTAACAACCCTGCTGGACTCCTATCAATTGCGGAGGAGACCTTGACAGAGTTCCTTTCCAAGGCTACAGGGACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTGGCAGCTCGAGCCTGCGGTCTTGTTAGTTTAGAACCTACAAAGATTGCGGAGATCCTAAAAGATCGTCCATCTTGGTTTCGGGACTGTCGGAGCCTAGAAGTTTTCACTATGTTCCCTGCCGGAAATGGAGGGACCATTGAACTTGTTTACATACAGACATATGCTCCAACAACACTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAAGTTTAGAGAATGGCAGTCTTGTGGTTTGTGAGAGGTCACTGTCTGGTTCTGGCACTGGCCCCAATGCAGCTGCTGCTGCTCAGTTTGTAAGGGCTGAAATGCTCCCCAGTGGCTATTTGATTCGACCGTGTGAGGGTGGAGGGTCAATCATCCACATTGTAGACCACTTAAATCTTGAGGCATGGAGTGTACCAGAAGTGCTGCGACCACTTTATGAATCGTCCAAAGTGGTGGCTCAGAAAATGACAATTGCGGCCCTTCGATATATCAGGCAAATAGCTCAGGAAACAAGTGGTGAAGTGGTGTATGGATTGGGTAGGCAGCCTGCTGTTCTGCGAACATTTAGCCAAAGATTGAGCAGAGGCTTCAATGATGCTGTAAACGGATTCAATGACGATGGATGGACTGTATTGAACTGTGATGGTGCTGAGGACGTAATTATTGCAGTTAATTCAACCAAGAATTTGAGTGGCACTTCTAATTCTGCAAGTTCTCTTACATTACTTGGAGGAATTCTCTGTGCAAAAGCCTCTATGTTGCTCCAAAACGTCCCTCCTGCAGTTTTGGTTCGCTTTCTCCGGGAGCACCGCTCAGAATGGGCTGATTTCAATGTTGATGCTTATTCTGCTGCATCACTGAAAGCTGGCACCTATGCTTATCCAGGAATGAGGCCCACTAGATTCACTGGCAGTCAAATAATCATGCCTCTTGGCCATACAATCGAACATGAAGAGATGCTTGAAGTTATTCGGCTTGAAGGCCACTCTCTTGCTCAAGAAGATGCTTTTGCGTCTAGGGACATTCATCTCTTACAGATATGTAGTGGAATTGATGAGAATGCTGTGGGGGCTTGTTCTGAGCTTATATTTGCTCCAATTGATGAAATGTTCCCTGATGATGCTCCATTGGTGCCTTCTGGTTTCCGCATCATCCCATTGGATTCAAAACCAGGTGATAAAAAGGATGCAATGCCCTCGAATCGGACTCTTGATTTGACATCTGGTCTTGAAGTTGGCCCTGCGACAACTCATGGTGCAGGAGATGCATCACCAAGTCATAACACTCGATCAGTGTTGACTATTGCCTTCCAGTTTCCTTTTGACAGCAGTTTGCAAGACAATGTTGCTATCATGGCTCGACAATATGTCCGAAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCTATATCTCCTGGAATGAACCCAGCTGTTGGGGCTAAACTTTCTCCTGGTTCTCCGGAAGCTCTTACACTAGCTCACTGGATCTGCCAGAGTTATAGCTACTATTTGGGGTCAGACTTGCTTAGATCAGATTCCCCCGTTGGTGACTCGATGCTGAAACATTTGTGGCATCATCAGGATGCGATTTTGTGCTGTTCGCTGAAGTCACTGCCAGTATTCATCTTTGCGAATCAAGCTGGCCTTGACATGTTGGAAACAACTCTAGTGGCTTTACAAGACATCACATTGGATAAAATATTTGACGAGTCTGGACGCAAGGCATTGTGTGCAGACTTTGCCAAGTTAATGCAGCAGGGGTTTGCTTATCTGCCAGCTGGGATCTGCATGTCCACCATGGGGCGGCATGTTTCATATGAGCAAGCCATAGGATGGAAAGTCCTTGCTGGAGAAGACAACACTGTTCACTGCTTAGCTTTCTCTTTTATAAACTGGTCGTTTGTATGA 2532 0.466 MAMAVAQHRESSSSGSIEKHHLDSGKYVRYTAEQVEALERVYSECPKPSSLKRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVCENGYMRQQLQTTSAATTDASCDSVVTTPQNSMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYIQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVLNCDGAEDVIIAVNSTKNLSGTSNSASSLTLLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFASRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDAMPSNRTLDLTSGLEVGPATTHGAGDASPSHNTRSVLTIAFQFPFDSSLQDNVAIMARQYVRSVISSVQRVAMAISPGMNPAVGAKLSPGSPEALTLAHWICQSYSYYLGSDLLRSDSPVGDSMLKHLWHHQDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFAKLMQQGFAYLPAGICMSTMGRHVSYEQAIGWKVLAGEDNTVHCLAFSFINWSFV* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2792 843 Coils Coil 91 122 - -
Dod03g2792 843 CDD homeodomain 26 86 IPR001356 GO:0003677
Dod03g2792 843 Pfam START domain 165 372 IPR002913 GO:0008289
Dod03g2792 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 843 IPR044830 GO:0003700
Dod03g2792 843 SUPERFAMILY Homeodomain-like 25 88 IPR009057 -
Dod03g2792 843 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g2792 843 Pfam Homeodomain 26 84 IPR001356 GO:0003677
Dod03g2792 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 843 - -
Dod03g2792 843 Pfam MEKHLA domain 699 842 IPR013978 -
Dod03g2792 843 CDD bZIP 78 117 - -
Dod03g2792 843 SUPERFAMILY Bet v1-like 164 376 - -
Dod03g2792 843 CDD START_ArGLABRA2_like 159 375 - -
Dod03g2792 843 SMART START_1 164 374 IPR002913 GO:0008289
Dod03g2792 843 Gene3D - 19 92 - -
Dod03g2792 843 MobiDBLite consensus disorder prediction 596 633 - -
Dod03g2792 843 Gene3D - 199 381 IPR023393 -
Dod03g2792 843 ProSiteProfiles START domain profile. 155 383 IPR002913 GO:0008289
Dod03g2792 843 ProSiteProfiles 'Homeobox' domain profile. 21 85 IPR001356 GO:0003677
Dod03g2792 843 SMART HOX_1 23 89 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2792 Dod-Chr3 59781658 59788637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2792 1 843 Homeobox Transcription Factor Family AT5G60690 82.332 0.0 1449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod03g2792 START 7e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2792 K09338 - gmx:100804870 1579.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2792 03 59781658 59788637 Dod03g2792 03 59781658 59788637 ECH
Dod10g1609 10 37044096 37049726 Dod03g2792 03 59781658 59788637 ECH