Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2785 ATGAAGGACTGTTGGTTTTTTGACAACAATTTCAACGGTGTATCAGACGAAGTTTTTGATAATGTGGTGGGGTTTTTCGATTTTCCAATAGAAGATGTGGAAGATGATGTTGCGGAGGAAGATTGGGATGCTCAGTTCAAGCAAGTTGAAGAGCCAGCTTTTGGTGTCTTTTCAGTATCGTCATCTGGGCTGTGTGGCAAAACTGAAAATGAGAATCCAAAACTTGGGAGGAGTTTCTCTGCTTCTCCTGCAGGGACTGCTACACCTAAATATGGAAAAACCATTCCCAAGCAGAATGTATCTTTCAATGGCAAAGATGTGCACCGATTCCAAACCTACAGCCCAGTTTCTGTTTTTGAAAGCAGTAGTTCTTCCTCTGTGGAGAACTCCAACTTTGATTTGCCTGTCATCCCAGTAAAGCGTCCTCGTGGCAAACGCCAACGCATCTCAAGCTTCAGCTTGCTACTCTCAATTCCTTTCATCTCGAATGCATCAACTTTTCGGAAAGATGAAAGGATGGATGTCTCTGAATCGTATTTACAAACCCAACCTGCTGGGAAATTATTAAATAGAGTGAAAAAGAAGCAGATAAGAAAGGATCTCCTCTCAGATCGCATCGAGAAGAAGAGATCCTCCCCACAAGAGTCAGATGCACCCAGAAAATGCATGCATTGTGAGATCACAACAACGCCGCAATGGAGAGAGGGACCTATGGGTCCGAAGACCCTTTGCAATGCTTGTGGTGTTCGATATAGGTCTGGCCGGCTCTTCCCTGAATACCGGCCTGCAGCTAGCCCCACTTTTGTACCATCATTGCACTCAAACTCTCACAAGAAGGTTATTGAAATGAGAAATAGAGCTGCTCGGGAAAATTTTAGGGGTCCTTCCATGTTGTCTTCATCATCAAACCTTCCTGGAAATCCTCTAGGCTAA 933 0.4427 MKDCWFFDNNFNGVSDEVFDNVVGFFDFPIEDVEDDVAEEDWDAQFKQVEEPAFGVFSVSSSGLCGKTENENPKLGRSFSASPAGTATPKYGKTIPKQNVSFNGKDVHRFQTYSPVSVFESSSSSSVENSNFDLPVIPVKRPRGKRQRISSFSLLLSIPFISNASTFRKDERMDVSESYLQTQPAGKLLNRVKKKQIRKDLLSDRIEKKRSSPQESDAPRKCMHCEITTTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSLHSNSHKKVIEMRNRAARENFRGPSMLSSSSNLPGNPLG* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2785 310 PANTHER GATA TRANSCRIPTION FACTOR 21 287 - -
Dod03g2785 310 PANTHER GATA TRANSCRIPTION FACTOR 13-RELATED 21 287 - -
Dod03g2785 310 MobiDBLite consensus disorder prediction 291 310 - -
Dod03g2785 310 CDD ZnF_GATA 221 268 IPR000679 GO:0006355|GO:0043565
Dod03g2785 310 ProSiteProfiles GATA-type zinc finger domain profile. 216 252 IPR000679 GO:0006355|GO:0043565
Dod03g2785 310 SMART GATA_3 216 266 IPR000679 GO:0006355|GO:0043565
Dod03g2785 310 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 218 279 - -
Dod03g2785 310 Pfam GATA zinc finger 222 255 IPR000679 GO:0006355|GO:0043565
Dod03g2785 310 ProSitePatterns GATA-type zinc finger domain. 222 247 IPR000679 GO:0006355|GO:0043565
Dod03g2785 310 MobiDBLite consensus disorder prediction 294 310 - -
Dod03g2785 310 Gene3D - 212 291 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2785 Dod-Chr3 59675762 59680207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2785 8 286 C2C2-Gata Transcription Factor Family AT1G08010 38.966 2.86e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod03g2785 GATA 4.8e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2785 - - gmx:100778675 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2785 03 59675762 59680207 Dod03g2785 03 59675762 59680207 ECH
Dod10g1605 10 36980923 36984363 Dod03g2785 03 59675762 59680207 ECH
Dod10g1605 10 36980923 36984363 Dod03g2785 03 59675762 59680207 PCT