Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2772 ATGTCACGTCACGGACAACCAGGGGACGTCCAAAACGGTGGCGTTTCAAAGATGGTGGCGGTTGGGAGCGAAGAGAGGGACCCGCTGAAGTGGGGGGCGGCGGCGGAAGCGATGAAGGGGAGTCACTGGGAGGAAGTGAAGAGTATGGTGAGGGAATACCGGCGGAATAACAATAACGCGGTGAGGGTGGACGGCAAGAGGATTACGGTGGCACATGTGGCGGCGGTGGAGAGAGGGGTGAGGGTGGAGATGAATGAGGAGGCGAGGGAGGGAGTGAAGGAGAGCAGTGAGTGGGAGATGGAGAGCTGGCTGAAAGGGACAGATTGTGATGGGGTCACTACTGGCTTTGGTGGAACCTCACACAGGAGAACCACCAAGGGTCTGGCTCTACAAACTGAACTCATTAGGTTTTTGAATGCTGGAATATTTGGCAATGTAACAGAAGCTTCCCATACATTGCCAATCAATGCAACAAGGGCTGCAATGCTGGTTAGAGTCAACACACTCCTTCAAGGTTACTCTGGCATCAAATATGAGATACTAGAAGCCATAGTGAAACTGCTAAATCACAAAATCACACCCTGCTTGCCCTTGCGTGGTTCAATTTCAGCCTCAGGTGATTTGGTCCCATTTTCGTACTTAGCTGGACTCCTCACGGGAACGCCAAATTCTAAAGCTGTTGGTCCCAATGGTGAATTTCTAAGGGCTTCAGAAGCATTCCATCTAGCTGGTATTGGTGATGGCTTCTTTGAGTTGCAGCCAAAGGAGGGTCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCATCATTAGTTCTATTTGAGGCTAACATCTTAACCGTCTTATCCGAAGTTATGTCAGCTATTTTTGCTGAAGTGATGCAAGGGAAGCCTGAGTTCACAGACCATTTGACACACAGATTGAAGCACCATCCTGGCCAGATTGGGGCAGCAGCTGTGATGGAACACATCTTGCATGGAAGTGCTTATGTTAAAGCAGCACAAAAGTTGCATGAGATGGACCCTCTCCAAAAGCCTAAGCAAGACAGATATGCTCTTAGGACTTCACCACAATGGTTAGGTCCTCAAGTTGAAGTCATTCCCTCATCAATAAAGTCCATTGAGAGGGAGATCAACTCTGTGAATGATAACCCTTTGATTGATGTGTCAAGGAACAAGGTTTTGCATGGTGGAAACTTTCAGGGCACCCCAGTTGGGGTCTCAATGGACAACACAAGGCTGGCTTTAGCTGCCATTGGAAAACTCCTGTTTGCTCAGATGTCTGAGTTGGTTAATGACGTTTACAATAATGGGTTGCCTTCAAATCTCTCCGGGGATCGCTGTCCAAGCTTGGATTATGGATTCAAGGGTGGTGAGATAGCAATGGCTGCGTATTGTTCTGAGGTTCAGTATCTAGCAAACCCTGTTACTAATGATGTGTTAAGTGCTGAGCAACACAACCAAGATGTGAACTCATTGGGACTGATCTCTGCAAGGAAAACAGCTGACGCTTTAGAGATATTGAAGCTCATGTGTTCAACCTACCTGGTTGCACTATGTCAAGCTATATAG 1578 0.4791 MSRHGQPGDVQNGGVSKMVAVGSEERDPLKWGAAAEAMKGSHWEEVKSMVREYRRNNNNAVRVDGKRITVAHVAAVERGVRVEMNEEAREGVKESSEWEMESWLKGTDCDGVTTGFGGTSHRRTTKGLALQTELIRFLNAGIFGNVTEASHTLPINATRAAMLVRVNTLLQGYSGIKYEILEAIVKLLNHKITPCLPLRGSISASGDLVPFSYLAGLLTGTPNSKAVGPNGEFLRASEAFHLAGIGDGFFELQPKEGLALVNGTGVGAGLASLVLFEANILTVLSEVMSAIFAEVMQGKPEFTDHLTHRLKHHPGQIGAAAVMEHILHGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQVEVIPSSIKSIEREINSVNDNPLIDVSRNKVLHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDVYNNGLPSNLSGDRCPSLDYGFKGGEIAMAAYCSEVQYLANPVTNDVLSAEQHNQDVNSLGLISARKTADALEILKLMCSTYLVALCQAI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2772 525 Gene3D Fumarase/aspartase (Central domain) 266 525 - -
Dod03g2772 525 Gene3D - 18 264 IPR024083 -
Dod03g2772 525 CDD PAL-HAL 68 525 IPR001106 -
Dod03g2772 525 PANTHER HISTIDINE AMMONIA-LYASE 20 525 IPR001106 -
Dod03g2772 525 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 27 525 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dod03g2772 525 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 20 525 - -
Dod03g2772 525 SUPERFAMILY L-aspartase-like 27 525 IPR008948 GO:0003824
Dod03g2772 525 Pfam Aromatic amino acid lyase 69 525 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2772 Dod-Chr3 59462394 59469717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2772 27 525 Monolignol Biosynthesis Gene Families AT3G10340 77.734 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2772 K10775 - egr:104421783 785.793